Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.32■■□□□ 1.8
PDE6BP35913 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
PDE6BP35913 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC26.32■■□□□ 1.8
PDE6BP35913 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PDE6BP35913 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC26.32■■□□□ 1.8
PDE6BP35913 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6BP35913 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC26.31■■□□□ 1.8
PDE6BP35913 PEX7-202ENST00000367756 680 ntTSL 3 BASIC26.31■■□□□ 1.8
PDE6BP35913 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6BP35913 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.31■■□□□ 1.8
PDE6BP35913 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC26.31■■□□□ 1.8
PDE6BP35913 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.31■■□□□ 1.8
PDE6BP35913 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
PDE6BP35913 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC26.3■■□□□ 1.8
PDE6BP35913 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDE6BP35913 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.3■■□□□ 1.8
PDE6BP35913 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDE6BP35913 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PDE6BP35913 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.3■■□□□ 1.8
PDE6BP35913 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
PDE6BP35913 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.29■■□□□ 1.8
PDE6BP35913 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
PDE6BP35913 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDE6BP35913 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.29■■□□□ 1.8
PDE6BP35913 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDE6BP35913 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
PDE6BP35913 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.28■■□□□ 1.8
PDE6BP35913 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE6BP35913 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC26.28■■□□□ 1.8
PDE6BP35913 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE6BP35913 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDE6BP35913 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PDE6BP35913 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
PDE6BP35913 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
PDE6BP35913 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.28■■□□□ 1.8
PDE6BP35913 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC26.28■■□□□ 1.8
PDE6BP35913 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.28■■□□□ 1.8
PDE6BP35913 RHOD-202ENST00000532559 538 ntTSL 3 BASIC26.28■■□□□ 1.8
PDE6BP35913 MME-217ENST00000616757 1315 ntTSL 5 BASIC26.28■■□□□ 1.8
PDE6BP35913 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC26.28■■□□□ 1.8
PDE6BP35913 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE6BP35913 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE6BP35913 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE6BP35913 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE6BP35913 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE6BP35913 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC26.27■■□□□ 1.8
PDE6BP35913 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC26.27■■□□□ 1.8
PDE6BP35913 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC26.27■■□□□ 1.8
PDE6BP35913 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC26.27■■□□□ 1.8
PDE6BP35913 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.27■■□□□ 1.8
PDE6BP35913 AL359736.2-201ENST00000621992 437 ntBASIC26.27■■□□□ 1.8
PDE6BP35913 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
PDE6BP35913 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE6BP35913 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE6BP35913 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PDE6BP35913 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDE6BP35913 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDE6BP35913 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.27■■□□□ 1.8
PDE6BP35913 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
PDE6BP35913 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDE6BP35913 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.26■■□□□ 1.79
PDE6BP35913 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDE6BP35913 AC061975.6-201ENST00000579045 1553 ntBASIC26.26■■□□□ 1.79
PDE6BP35913 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.26■■□□□ 1.79
PDE6BP35913 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
PDE6BP35913 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDE6BP35913 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDE6BP35913 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDE6BP35913 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDE6BP35913 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDE6BP35913 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC26.26■■□□□ 1.79
PDE6BP35913 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDE6BP35913 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDE6BP35913 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
PDE6BP35913 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDE6BP35913 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
PDE6BP35913 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDE6BP35913 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC26.25■■□□□ 1.79
PDE6BP35913 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.25■■□□□ 1.79
PDE6BP35913 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC26.25■■□□□ 1.79
PDE6BP35913 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDE6BP35913 AC008403.3-201ENST00000598924 454 ntBASIC26.25■■□□□ 1.79
PDE6BP35913 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
PDE6BP35913 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
PDE6BP35913 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PDE6BP35913 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDE6BP35913 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC26.24■■□□□ 1.79
PDE6BP35913 KRT17P1-201ENST00000399211 1546 ntBASIC26.24■■□□□ 1.79
PDE6BP35913 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDE6BP35913 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.24■■□□□ 1.79
PDE6BP35913 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC26.24■■□□□ 1.79
PDE6BP35913 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
PDE6BP35913 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDE6BP35913 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
PDE6BP35913 NME6-213ENST00000451657 871 ntTSL 2 BASIC26.24■■□□□ 1.79
PDE6BP35913 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC26.24■■□□□ 1.79
PDE6BP35913 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDE6BP35913 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC26.24■■□□□ 1.79
PDE6BP35913 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDE6BP35913 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms