Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BMP4P12644 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
BMP4P12644 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BMP4P12644 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BMP4P12644 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.28■□□□□ 0.68
BMP4P12644 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BMP4P12644 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
BMP4P12644 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.27■□□□□ 0.68
BMP4P12644 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BMP4P12644 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
BMP4P12644 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.27■□□□□ 0.68
BMP4P12644 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
BMP4P12644 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.27■□□□□ 0.68
BMP4P12644 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.27■□□□□ 0.68
BMP4P12644 AF213884.3-201ENST00000563833 479 ntBASIC19.27■□□□□ 0.68
BMP4P12644 MIR4767-201ENST00000582827 78 ntBASIC19.27■□□□□ 0.68
BMP4P12644 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BMP4P12644 AL031432.3-201ENST00000607698 485 ntBASIC19.27■□□□□ 0.68
BMP4P12644 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BMP4P12644 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BMP4P12644 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
BMP4P12644 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BMP4P12644 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BMP4P12644 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BMP4P12644 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BMP4P12644 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BMP4P12644 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
BMP4P12644 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.26■□□□□ 0.67
BMP4P12644 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BMP4P12644 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.26■□□□□ 0.67
BMP4P12644 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
BMP4P12644 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.26■□□□□ 0.67
BMP4P12644 MIR939-201ENST00000401314 82 ntBASIC19.26■□□□□ 0.67
BMP4P12644 AL136967.2-201ENST00000623968 743 ntBASIC19.26■□□□□ 0.67
BMP4P12644 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BMP4P12644 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BMP4P12644 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.25■□□□□ 0.67
BMP4P12644 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.25■□□□□ 0.67
BMP4P12644 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 RASA4CP-201ENST00000424092 1398 ntBASIC19.25■□□□□ 0.67
BMP4P12644 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.25■□□□□ 0.67
BMP4P12644 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
BMP4P12644 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 AL020996.1-203ENST00000536896 2307 ntBASIC19.25■□□□□ 0.67
BMP4P12644 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BMP4P12644 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 FEM1AP1-201ENST00000431297 1995 ntBASIC19.24■□□□□ 0.67
BMP4P12644 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.24■□□□□ 0.67
BMP4P12644 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.24■□□□□ 0.67
BMP4P12644 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.24■□□□□ 0.67
BMP4P12644 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.24■□□□□ 0.67
BMP4P12644 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BMP4P12644 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.24■□□□□ 0.67
BMP4P12644 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 AP001330.3-201ENST00000520123 633 ntBASIC19.24■□□□□ 0.67
BMP4P12644 AC136469.2-201ENST00000623944 1028 ntBASIC19.24■□□□□ 0.67
BMP4P12644 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.24■□□□□ 0.67
BMP4P12644 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
BMP4P12644 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
BMP4P12644 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BMP4P12644 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
BMP4P12644 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
BMP4P12644 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP4P12644 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP4P12644 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP4P12644 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.23■□□□□ 0.67
BMP4P12644 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.23■□□□□ 0.67
BMP4P12644 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP4P12644 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP4P12644 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BMP4P12644 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BMP4P12644 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP4P12644 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.23■□□□□ 0.67
BMP4P12644 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.23■□□□□ 0.67
BMP4P12644 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.23■□□□□ 0.67
BMP4P12644 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.23■□□□□ 0.67
BMP4P12644 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BMP4P12644 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BMP4P12644 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BMP4P12644 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BMP4P12644 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BMP4P12644 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms