Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 AC137767.1-201ENST00000602918 1920 ntBASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CSB-PGBD3P0DP91 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
CSB-PGBD3P0DP91 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
CSB-PGBD3P0DP91 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CSB-PGBD3P0DP91 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CSB-PGBD3P0DP91 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CSB-PGBD3P0DP91 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC28.2■■■□□ 2.1
CSB-PGBD3P0DP91 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CSB-PGBD3P0DP91 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC28.2■■■□□ 2.1
CSB-PGBD3P0DP91 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC28.2■■■□□ 2.1
CSB-PGBD3P0DP91 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CSB-PGBD3P0DP91 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
CSB-PGBD3P0DP91 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC28.2■■■□□ 2.1
CSB-PGBD3P0DP91 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 LSM12P1-201ENST00000411836 588 ntBASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 CASP6-205ENST00000505486 538 ntTSL 4 BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 AC061975.6-201ENST00000579045 1553 ntBASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 RARG-204ENST00000543726 1779 ntTSL 2 BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CSB-PGBD3P0DP91 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 AC026366.1-201ENST00000488803 879 ntBASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 UNC93B5-201ENST00000530315 699 ntBASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 AC243732.1-201ENST00000612648 864 ntBASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CSB-PGBD3P0DP91 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 UNC93B4-201ENST00000505679 747 ntBASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
CSB-PGBD3P0DP91 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 AP003097.1-201ENST00000530657 1135 ntBASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 AC073648.6-201ENST00000641589 218 ntBASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CSB-PGBD3P0DP91 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSB-PGBD3P0DP91 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC28.15■■■□□ 2.1
CSB-PGBD3P0DP91 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSB-PGBD3P0DP91 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSB-PGBD3P0DP91 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
CSB-PGBD3P0DP91 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CSB-PGBD3P0DP91 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CSB-PGBD3P0DP91 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CSB-PGBD3P0DP91 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CSB-PGBD3P0DP91 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC28.14■■■□□ 2.1
CSB-PGBD3P0DP91 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
CSB-PGBD3P0DP91 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC28.13■■■□□ 2.09
CSB-PGBD3P0DP91 AC087742.1-201ENST00000575880 1738 ntBASIC28.12■■■□□ 2.09
CSB-PGBD3P0DP91 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
CSB-PGBD3P0DP91 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC28.12■■■□□ 2.09
CSB-PGBD3P0DP91 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC28.12■■■□□ 2.09
CSB-PGBD3P0DP91 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms