Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHGBP05060 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHGBP05060 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHGBP05060 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHGBP05060 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHGBP05060 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CHGBP05060 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHGBP05060 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
CHGBP05060 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
CHGBP05060 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.55■■□□□ 1.68
CHGBP05060 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHGBP05060 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.55■■□□□ 1.68
CHGBP05060 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHGBP05060 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC25.55■■□□□ 1.68
CHGBP05060 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHGBP05060 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHGBP05060 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHGBP05060 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.55■■□□□ 1.68
CHGBP05060 AC004911.1-201ENST00000416316 871 ntBASIC25.55■■□□□ 1.68
CHGBP05060 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.55■■□□□ 1.68
CHGBP05060 AP001160.3-201ENST00000601484 763 ntBASIC25.55■■□□□ 1.68
CHGBP05060 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.55■■□□□ 1.68
CHGBP05060 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.55■■□□□ 1.68
CHGBP05060 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.55■■□□□ 1.68
CHGBP05060 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC25.55■■□□□ 1.68
CHGBP05060 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHGBP05060 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHGBP05060 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.54■■□□□ 1.68
CHGBP05060 AC006015.1-201ENST00000429970 570 ntBASIC25.54■■□□□ 1.68
CHGBP05060 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.54■■□□□ 1.68
CHGBP05060 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHGBP05060 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25.54■■□□□ 1.68
CHGBP05060 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.54■■□□□ 1.68
CHGBP05060 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CHGBP05060 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC25.54■■□□□ 1.68
CHGBP05060 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
CHGBP05060 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC25.54■■□□□ 1.68
CHGBP05060 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.54■■□□□ 1.68
CHGBP05060 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHGBP05060 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.53■■□□□ 1.68
CHGBP05060 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHGBP05060 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHGBP05060 RNF146-206ENST00000480444 843 ntTSL 2 BASIC25.53■■□□□ 1.68
CHGBP05060 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.53■■□□□ 1.68
CHGBP05060 SLC7A5P2-201ENST00000553010 536 ntBASIC25.53■■□□□ 1.68
CHGBP05060 AC011767.1-201ENST00000617410 1153 ntBASIC25.53■■□□□ 1.68
CHGBP05060 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHGBP05060 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.53■■□□□ 1.68
CHGBP05060 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
CHGBP05060 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CHGBP05060 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CHGBP05060 AC061975.6-201ENST00000579045 1553 ntBASIC25.52■■□□□ 1.68
CHGBP05060 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHGBP05060 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
CHGBP05060 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHGBP05060 AC137761.2-201ENST00000561729 223 ntBASIC25.52■■□□□ 1.68
CHGBP05060 AC145350.3-201ENST00000569033 163 ntBASIC25.52■■□□□ 1.68
CHGBP05060 AC053503.5-201ENST00000601508 636 ntBASIC25.52■■□□□ 1.68
CHGBP05060 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.52■■□□□ 1.68
CHGBP05060 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHGBP05060 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHGBP05060 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.52■■□□□ 1.68
CHGBP05060 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHGBP05060 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHGBP05060 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CHGBP05060 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CHGBP05060 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHGBP05060 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHGBP05060 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHGBP05060 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHGBP05060 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHGBP05060 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.51■■□□□ 1.67
CHGBP05060 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC25.51■■□□□ 1.67
CHGBP05060 AC138907.5-202ENST00000569484 235 ntBASIC25.51■■□□□ 1.67
CHGBP05060 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC25.51■■□□□ 1.67
CHGBP05060 UBE2DNL-204ENST00000602536 740 ntBASIC25.51■■□□□ 1.67
CHGBP05060 AL137784.2-201ENST00000607332 1000 ntBASIC25.51■■□□□ 1.67
CHGBP05060 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC25.51■■□□□ 1.67
CHGBP05060 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CHGBP05060 GOLGA2P6-201ENST00000340929 2049 ntBASIC25.51■■□□□ 1.67
CHGBP05060 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.51■■□□□ 1.67
CHGBP05060 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
CHGBP05060 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHGBP05060 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.5■■□□□ 1.67
CHGBP05060 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHGBP05060 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHGBP05060 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CHGBP05060 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.5■■□□□ 1.67
CHGBP05060 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
CHGBP05060 AC010141.2-201ENST00000452426 721 ntBASIC25.5■■□□□ 1.67
CHGBP05060 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC25.5■■□□□ 1.67
CHGBP05060 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
CHGBP05060 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
CHGBP05060 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CHGBP05060 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
CHGBP05060 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CHGBP05060 KRT19P1-201ENST00000405746 1186 ntBASIC25.49■■□□□ 1.67
CHGBP05060 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC25.49■■□□□ 1.67
CHGBP05060 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC25.49■■□□□ 1.67
CHGBP05060 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms