Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC32.2■■■□□ 2.75
RAPGEF3O95398 ABHD17AP6-201ENST00000458502 1044 ntBASIC32.2■■■□□ 2.75
RAPGEF3O95398 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC32.2■■■□□ 2.75
RAPGEF3O95398 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC32.2■■■□□ 2.75
RAPGEF3O95398 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC32.2■■■□□ 2.75
RAPGEF3O95398 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC32.2■■■□□ 2.75
RAPGEF3O95398 AC243732.1-201ENST00000612648 864 ntBASIC32.2■■■□□ 2.75
RAPGEF3O95398 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF3O95398 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC32.2■■■□□ 2.75
RAPGEF3O95398 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.74
RAPGEF3O95398 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
RAPGEF3O95398 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RAPGEF3O95398 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
RAPGEF3O95398 OR7E47P-201ENST00000546390 1422 ntBASIC32.19■■■□□ 2.74
RAPGEF3O95398 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
RAPGEF3O95398 POU5F1P4-201ENST00000413175 1085 ntBASIC32.19■■■□□ 2.74
RAPGEF3O95398 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC32.19■■■□□ 2.74
RAPGEF3O95398 RNF146-206ENST00000480444 843 ntTSL 2 BASIC32.19■■■□□ 2.74
RAPGEF3O95398 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RAPGEF3O95398 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC32.19■■■□□ 2.74
RAPGEF3O95398 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC32.19■■■□□ 2.74
RAPGEF3O95398 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RAPGEF3O95398 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RAPGEF3O95398 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RAPGEF3O95398 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC32.19■■■□□ 2.74
RAPGEF3O95398 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
RAPGEF3O95398 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC32.18■■■□□ 2.74
RAPGEF3O95398 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RAPGEF3O95398 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
RAPGEF3O95398 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC32.18■■■□□ 2.74
RAPGEF3O95398 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
RAPGEF3O95398 PNMA6B-201ENST00000538162 1200 ntBASIC32.18■■■□□ 2.74
RAPGEF3O95398 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RAPGEF3O95398 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RAPGEF3O95398 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RAPGEF3O95398 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
RAPGEF3O95398 KRT16P2-201ENST00000414673 1423 ntBASIC32.17■■■□□ 2.74
RAPGEF3O95398 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC32.17■■■□□ 2.74
RAPGEF3O95398 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
RAPGEF3O95398 KRT17P3-201ENST00000420566 1262 ntBASIC32.17■■■□□ 2.74
RAPGEF3O95398 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC32.17■■■□□ 2.74
RAPGEF3O95398 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
RAPGEF3O95398 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
RAPGEF3O95398 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
RAPGEF3O95398 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC32.17■■■□□ 2.74
RAPGEF3O95398 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
RAPGEF3O95398 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 LINC01960-201ENST00000563759 1884 ntBASIC32.16■■■□□ 2.74
RAPGEF3O95398 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RAPGEF3O95398 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 REXO2-216ENST00000544196 452 ntTSL 3 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
RAPGEF3O95398 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC32.16■■■□□ 2.74
RAPGEF3O95398 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RAPGEF3O95398 THRA-202ENST00000394121 2260 ntTSL 2 BASIC32.15■■■□□ 2.74
RAPGEF3O95398 TSPY7P-201ENST00000431358 1114 ntBASIC32.15■■■□□ 2.74
RAPGEF3O95398 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC32.15■■■□□ 2.74
RAPGEF3O95398 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
RAPGEF3O95398 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC32.15■■■□□ 2.74
RAPGEF3O95398 AL034346.1-201ENST00000568244 1277 ntBASIC32.15■■■□□ 2.74
RAPGEF3O95398 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
RAPGEF3O95398 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC32.15■■■□□ 2.74
RAPGEF3O95398 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC32.15■■■□□ 2.74
RAPGEF3O95398 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC32.15■■■□□ 2.74
RAPGEF3O95398 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
RAPGEF3O95398 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC32.14■■■□□ 2.74
RAPGEF3O95398 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC32.14■■■□□ 2.74
RAPGEF3O95398 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
RAPGEF3O95398 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC32.14■■■□□ 2.74
RAPGEF3O95398 AC069544.1-201ENST00000609399 999 ntBASIC32.14■■■□□ 2.74
RAPGEF3O95398 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC32.14■■■□□ 2.74
RAPGEF3O95398 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC32.13■■■□□ 2.73
RAPGEF3O95398 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
RAPGEF3O95398 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
RAPGEF3O95398 RCN1P1-201ENST00000400413 996 ntBASIC32.13■■■□□ 2.73
RAPGEF3O95398 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
RAPGEF3O95398 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC32.13■■■□□ 2.73
RAPGEF3O95398 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC32.13■■■□□ 2.73
RAPGEF3O95398 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
RAPGEF3O95398 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
RAPGEF3O95398 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
RAPGEF3O95398 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RAPGEF3O95398 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC32.12■■■□□ 2.73
RAPGEF3O95398 TSPY15P-201ENST00000457163 923 ntBASIC32.12■■■□□ 2.73
RAPGEF3O95398 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC32.12■■■□□ 2.73
RAPGEF3O95398 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC32.12■■■□□ 2.73
RAPGEF3O95398 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
RAPGEF3O95398 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC32.12■■■□□ 2.73
RAPGEF3O95398 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms