Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GPC4O75487 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.11■□□□□ 0.97
GPC4O75487 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GPC4O75487 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
GPC4O75487 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GPC4O75487 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.11■□□□□ 0.97
GPC4O75487 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GPC4O75487 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.11■□□□□ 0.97
GPC4O75487 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GPC4O75487 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.11■□□□□ 0.97
GPC4O75487 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GPC4O75487 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.11■□□□□ 0.97
GPC4O75487 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.11■□□□□ 0.97
GPC4O75487 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GPC4O75487 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.11■□□□□ 0.97
GPC4O75487 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GPC4O75487 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GPC4O75487 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GPC4O75487 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GPC4O75487 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GPC4O75487 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GPC4O75487 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GPC4O75487 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GPC4O75487 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.1■□□□□ 0.97
GPC4O75487 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GPC4O75487 AL034346.1-201ENST00000568244 1277 ntBASIC21.1■□□□□ 0.97
GPC4O75487 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.1■□□□□ 0.97
GPC4O75487 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
GPC4O75487 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.1■□□□□ 0.97
GPC4O75487 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
GPC4O75487 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.1■□□□□ 0.97
GPC4O75487 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GPC4O75487 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.09■□□□□ 0.97
GPC4O75487 AP004607.7-201ENST00000527152 1677 ntBASIC21.09■□□□□ 0.97
GPC4O75487 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
GPC4O75487 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.09■□□□□ 0.97
GPC4O75487 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GPC4O75487 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
GPC4O75487 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.09■□□□□ 0.97
GPC4O75487 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
GPC4O75487 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GPC4O75487 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.09■□□□□ 0.97
GPC4O75487 ZNRF2P3-201ENST00000424200 374 ntBASIC21.09■□□□□ 0.97
GPC4O75487 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.09■□□□□ 0.97
GPC4O75487 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.09■□□□□ 0.97
GPC4O75487 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.09■□□□□ 0.97
GPC4O75487 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.09■□□□□ 0.97
GPC4O75487 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.09■□□□□ 0.97
GPC4O75487 AL354811.1-201ENST00000610286 706 ntBASIC21.09■□□□□ 0.97
GPC4O75487 AL358852.1-201ENST00000623174 1268 ntBASIC21.09■□□□□ 0.97
GPC4O75487 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.09■□□□□ 0.97
GPC4O75487 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.09■□□□□ 0.97
GPC4O75487 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.09■□□□□ 0.97
GPC4O75487 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GPC4O75487 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.09■□□□□ 0.97
GPC4O75487 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.09■□□□□ 0.97
GPC4O75487 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GPC4O75487 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GPC4O75487 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GPC4O75487 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GPC4O75487 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GPC4O75487 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GPC4O75487 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.08■□□□□ 0.97
GPC4O75487 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
GPC4O75487 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GPC4O75487 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
GPC4O75487 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
GPC4O75487 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.08■□□□□ 0.97
GPC4O75487 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.08■□□□□ 0.97
GPC4O75487 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.08■□□□□ 0.97
GPC4O75487 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GPC4O75487 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
GPC4O75487 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GPC4O75487 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.07■□□□□ 0.96
GPC4O75487 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.07■□□□□ 0.96
GPC4O75487 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.07■□□□□ 0.96
GPC4O75487 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.07■□□□□ 0.96
GPC4O75487 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
GPC4O75487 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.07■□□□□ 0.96
GPC4O75487 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GPC4O75487 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GPC4O75487 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GPC4O75487 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.07■□□□□ 0.96
GPC4O75487 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GPC4O75487 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.07■□□□□ 0.96
GPC4O75487 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GPC4O75487 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
GPC4O75487 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.06■□□□□ 0.96
GPC4O75487 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GPC4O75487 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC4O75487 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.06■□□□□ 0.96
GPC4O75487 BX005040.4-201ENST00000637145 1518 ntBASIC21.06■□□□□ 0.96
GPC4O75487 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC4O75487 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GPC4O75487 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.06■□□□□ 0.96
GPC4O75487 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.06■□□□□ 0.96
GPC4O75487 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.06■□□□□ 0.96
GPC4O75487 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.06■□□□□ 0.96
GPC4O75487 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GPC4O75487 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms