Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CTNSO60931 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.86■□□□□ 0.77
CTNSO60931 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CTNSO60931 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CTNSO60931 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.86■□□□□ 0.77
CTNSO60931 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CTNSO60931 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNSO60931 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNSO60931 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTNSO60931 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNSO60931 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNSO60931 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.85■□□□□ 0.77
CTNSO60931 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNSO60931 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTNSO60931 FBXW4P1-201ENST00000426721 2239 ntBASIC19.85■□□□□ 0.77
CTNSO60931 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CTNSO60931 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTNSO60931 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CTNSO60931 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CTNSO60931 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNSO60931 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNSO60931 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.84■□□□□ 0.77
CTNSO60931 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.84■□□□□ 0.77
CTNSO60931 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.84■□□□□ 0.77
CTNSO60931 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNSO60931 AP001160.3-201ENST00000601484 763 ntBASIC19.84■□□□□ 0.77
CTNSO60931 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNSO60931 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNSO60931 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CTNSO60931 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CTNSO60931 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.84■□□□□ 0.77
CTNSO60931 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CTNSO60931 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.84■□□□□ 0.77
CTNSO60931 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNSO60931 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.83■□□□□ 0.77
CTNSO60931 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNSO60931 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNSO60931 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNSO60931 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CTNSO60931 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CTNSO60931 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.83■□□□□ 0.77
CTNSO60931 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNSO60931 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTNSO60931 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CTNSO60931 AC244015.2-201ENST00000616358 1861 ntBASIC19.83■□□□□ 0.76
CTNSO60931 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.83■□□□□ 0.76
CTNSO60931 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNSO60931 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CTNSO60931 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.83■□□□□ 0.76
CTNSO60931 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CTNSO60931 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.83■□□□□ 0.76
CTNSO60931 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNSO60931 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CTNSO60931 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNSO60931 LINC00565-201ENST00000562710 2331 ntBASIC19.82■□□□□ 0.76
CTNSO60931 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.82■□□□□ 0.76
CTNSO60931 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CTNSO60931 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNSO60931 AC010141.2-201ENST00000452426 721 ntBASIC19.82■□□□□ 0.76
CTNSO60931 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.82■□□□□ 0.76
CTNSO60931 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTNSO60931 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CTNSO60931 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.82■□□□□ 0.76
CTNSO60931 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTNSO60931 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTNSO60931 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.81■□□□□ 0.76
CTNSO60931 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTNSO60931 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms