Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CUBNO60494 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CUBNO60494 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.07■□□□□ 0.32
CUBNO60494 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CUBNO60494 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.07■□□□□ 0.32
CUBNO60494 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.07■□□□□ 0.32
CUBNO60494 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.07■□□□□ 0.32
CUBNO60494 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.07■□□□□ 0.32
CUBNO60494 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUBNO60494 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.07■□□□□ 0.32
CUBNO60494 LINC00526-201ENST00000581067 1875 ntBASIC17.07■□□□□ 0.32
CUBNO60494 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.06■□□□□ 0.32
CUBNO60494 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CUBNO60494 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUBNO60494 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CUBNO60494 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CUBNO60494 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUBNO60494 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CUBNO60494 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.06■□□□□ 0.32
CUBNO60494 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.06■□□□□ 0.32
CUBNO60494 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CUBNO60494 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.06■□□□□ 0.32
CUBNO60494 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUBNO60494 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CUBNO60494 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUBNO60494 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CUBNO60494 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.05■□□□□ 0.32
CUBNO60494 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUBNO60494 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUBNO60494 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUBNO60494 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUBNO60494 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CUBNO60494 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CUBNO60494 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CUBNO60494 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CUBNO60494 RPPH1-201ENST00000516869 333 ntBASIC17.04■□□□□ 0.32
CUBNO60494 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CUBNO60494 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CUBNO60494 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CUBNO60494 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CUBNO60494 EED-207ENST00000528180 1745 ntTSL 5 BASIC17.04■□□□□ 0.32
CUBNO60494 C2orf69P4-201ENST00000565394 541 ntBASIC17.04■□□□□ 0.32
CUBNO60494 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CUBNO60494 AC069236.1-201ENST00000604339 616 ntBASIC17.04■□□□□ 0.32
CUBNO60494 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
CUBNO60494 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.04■□□□□ 0.32
CUBNO60494 TSPY15P-201ENST00000457163 923 ntBASIC17.04■□□□□ 0.32
CUBNO60494 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CUBNO60494 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CUBNO60494 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CUBNO60494 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.03■□□□□ 0.32
CUBNO60494 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.03■□□□□ 0.32
CUBNO60494 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.03■□□□□ 0.32
CUBNO60494 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 REXO1L12P-201ENST00000622156 912 ntBASIC17.03■□□□□ 0.32
CUBNO60494 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.03■□□□□ 0.32
CUBNO60494 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.03■□□□□ 0.32
CUBNO60494 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.03■□□□□ 0.32
CUBNO60494 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CUBNO60494 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.03■□□□□ 0.32
CUBNO60494 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.03■□□□□ 0.32
CUBNO60494 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
CUBNO60494 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CUBNO60494 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.02■□□□□ 0.32
CUBNO60494 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
CUBNO60494 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.02■□□□□ 0.32
CUBNO60494 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.02■□□□□ 0.32
CUBNO60494 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.02■□□□□ 0.32
CUBNO60494 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.02■□□□□ 0.32
CUBNO60494 AL162412.1-201ENST00000567129 965 ntBASIC17.02■□□□□ 0.32
CUBNO60494 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CUBNO60494 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CUBNO60494 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.02■□□□□ 0.32
CUBNO60494 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.02■□□□□ 0.32
CUBNO60494 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CUBNO60494 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CUBNO60494 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.02■□□□□ 0.32
CUBNO60494 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CUBNO60494 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CUBNO60494 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.02■□□□□ 0.32
CUBNO60494 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CUBNO60494 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.02■□□□□ 0.32
CUBNO60494 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CUBNO60494 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms