Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF13O43567 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNF13O43567 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF13O43567 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF13O43567 Z98882.1-201ENST00000622160 2253 ntBASIC19.2■□□□□ 0.66
RNF13O43567 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF13O43567 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
RNF13O43567 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF13O43567 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF13O43567 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF13O43567 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF13O43567 AC133561.4-201ENST00000566112 224 ntBASIC19.2■□□□□ 0.66
RNF13O43567 AL355001.2-201ENST00000620617 1191 ntBASIC19.2■□□□□ 0.66
RNF13O43567 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF13O43567 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
RNF13O43567 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RNF13O43567 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF13O43567 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF13O43567 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF13O43567 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF13O43567 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF13O43567 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF13O43567 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF13O43567 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF13O43567 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF13O43567 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF13O43567 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF13O43567 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.19■□□□□ 0.66
RNF13O43567 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF13O43567 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF13O43567 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF13O43567 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF13O43567 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF13O43567 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF13O43567 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF13O43567 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF13O43567 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF13O43567 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
RNF13O43567 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF13O43567 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF13O43567 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 AP001330.3-201ENST00000520123 633 ntBASIC19.18■□□□□ 0.66
RNF13O43567 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.18■□□□□ 0.66
RNF13O43567 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF13O43567 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 TSPY26P-201ENST00000476365 1326 ntBASIC19.18■□□□□ 0.66
RNF13O43567 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF13O43567 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF13O43567 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF13O43567 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF13O43567 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF13O43567 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF13O43567 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF13O43567 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF13O43567 SMUG1P1-201ENST00000590640 811 ntBASIC19.17■□□□□ 0.66
RNF13O43567 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF13O43567 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF13O43567 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF13O43567 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF13O43567 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF13O43567 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF13O43567 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF13O43567 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.16■□□□□ 0.66
RNF13O43567 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF13O43567 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF13O43567 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.16■□□□□ 0.66
RNF13O43567 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF13O43567 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF13O43567 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RNF13O43567 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RNF13O43567 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RNF13O43567 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF13O43567 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.15■□□□□ 0.66
RNF13O43567 FEM1AP4-201ENST00000443167 1987 ntBASIC19.15■□□□□ 0.66
RNF13O43567 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
RNF13O43567 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RNF13O43567 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.15■□□□□ 0.66
RNF13O43567 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms