Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.3■■□□□ 1.48
ATP2A1O14983 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2A1O14983 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.3■■□□□ 1.48
ATP2A1O14983 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2A1O14983 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2A1O14983 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ATP2A1O14983 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
ATP2A1O14983 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2A1O14983 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.29■■□□□ 1.48
ATP2A1O14983 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2A1O14983 RBM17P2-201ENST00000616397 1405 ntBASIC24.29■■□□□ 1.48
ATP2A1O14983 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2A1O14983 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
ATP2A1O14983 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.29■■□□□ 1.48
ATP2A1O14983 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.29■■□□□ 1.48
ATP2A1O14983 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2A1O14983 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP2A1O14983 AC127496.7-201ENST00000625110 1798 ntBASIC24.29■■□□□ 1.48
ATP2A1O14983 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.28■■□□□ 1.48
ATP2A1O14983 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC24.28■■□□□ 1.48
ATP2A1O14983 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
ATP2A1O14983 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
ATP2A1O14983 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP2A1O14983 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP2A1O14983 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
ATP2A1O14983 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP2A1O14983 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.28■■□□□ 1.48
ATP2A1O14983 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.27■■□□□ 1.48
ATP2A1O14983 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.27■■□□□ 1.48
ATP2A1O14983 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP2A1O14983 MIPEPP3-201ENST00000412105 444 ntBASIC24.27■■□□□ 1.48
ATP2A1O14983 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ATP2A1O14983 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.27■■□□□ 1.48
ATP2A1O14983 MIR4758-201ENST00000577688 71 ntBASIC24.27■■□□□ 1.48
ATP2A1O14983 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.27■■□□□ 1.48
ATP2A1O14983 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
ATP2A1O14983 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.26■■□□□ 1.47
ATP2A1O14983 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP2A1O14983 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
ATP2A1O14983 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
ATP2A1O14983 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC24.26■■□□□ 1.47
ATP2A1O14983 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.26■■□□□ 1.47
ATP2A1O14983 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP2A1O14983 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
ATP2A1O14983 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ATP2A1O14983 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP2A1O14983 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP2A1O14983 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ATP2A1O14983 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.26■■□□□ 1.47
ATP2A1O14983 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.26■■□□□ 1.47
ATP2A1O14983 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
ATP2A1O14983 AC069236.1-201ENST00000604339 616 ntBASIC24.26■■□□□ 1.47
ATP2A1O14983 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC24.26■■□□□ 1.47
ATP2A1O14983 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
ATP2A1O14983 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP2A1O14983 MKRN4P-201ENST00000444706 1521 ntBASIC24.25■■□□□ 1.47
ATP2A1O14983 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.25■■□□□ 1.47
ATP2A1O14983 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC24.25■■□□□ 1.47
ATP2A1O14983 AC098934.4-201ENST00000564127 592 ntBASIC24.25■■□□□ 1.47
ATP2A1O14983 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC24.25■■□□□ 1.47
ATP2A1O14983 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.25■■□□□ 1.47
ATP2A1O14983 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.25■■□□□ 1.47
ATP2A1O14983 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 AC061975.6-201ENST00000579045 1553 ntBASIC24.25■■□□□ 1.47
ATP2A1O14983 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP2A1O14983 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ATP2A1O14983 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.24■■□□□ 1.47
ATP2A1O14983 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP2A1O14983 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.24■■□□□ 1.47
ATP2A1O14983 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ATP2A1O14983 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP2A1O14983 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
ATP2A1O14983 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP2A1O14983 AC093787.1-201ENST00000450396 207 ntBASIC24.24■■□□□ 1.47
ATP2A1O14983 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC24.24■■□□□ 1.47
ATP2A1O14983 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.24■■□□□ 1.47
ATP2A1O14983 AC008694.1-202ENST00000636953 945 ntBASIC24.24■■□□□ 1.47
ATP2A1O14983 TMEM191A-211ENST00000637163 1067 ntBASIC24.24■■□□□ 1.47
ATP2A1O14983 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
ATP2A1O14983 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.24■■□□□ 1.47
ATP2A1O14983 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP2A1O14983 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP2A1O14983 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP2A1O14983 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
ATP2A1O14983 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
ATP2A1O14983 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
ATP2A1O14983 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.23■■□□□ 1.47
ATP2A1O14983 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC24.23■■□□□ 1.47
ATP2A1O14983 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms