Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DDX39AO00148 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.83■■□□□ 1.41
DDX39AO00148 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.83■■□□□ 1.41
DDX39AO00148 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.83■■□□□ 1.41
DDX39AO00148 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
DDX39AO00148 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX39AO00148 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
DDX39AO00148 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX39AO00148 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX39AO00148 ECEL1P1-201ENST00000373592 1742 ntBASIC23.82■■□□□ 1.4
DDX39AO00148 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX39AO00148 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX39AO00148 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX39AO00148 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX39AO00148 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX39AO00148 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DDX39AO00148 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
DDX39AO00148 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX39AO00148 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
DDX39AO00148 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
DDX39AO00148 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.82■■□□□ 1.4
DDX39AO00148 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX39AO00148 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX39AO00148 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX39AO00148 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.81■■□□□ 1.4
DDX39AO00148 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX39AO00148 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.81■■□□□ 1.4
DDX39AO00148 RAP2CP1-201ENST00000605103 478 ntBASIC23.81■■□□□ 1.4
DDX39AO00148 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX39AO00148 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.81■■□□□ 1.4
DDX39AO00148 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
DDX39AO00148 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DDX39AO00148 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.8■■□□□ 1.4
DDX39AO00148 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.8■■□□□ 1.4
DDX39AO00148 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
DDX39AO00148 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DDX39AO00148 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX39AO00148 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.79■■□□□ 1.4
DDX39AO00148 EP400NL-214ENST00000641289 2402 ntBASIC23.79■■□□□ 1.4
DDX39AO00148 AL117328.2-201ENST00000624617 1940 ntBASIC23.79■■□□□ 1.4
DDX39AO00148 AC026185.1-201ENST00000445748 174 ntBASIC23.79■■□□□ 1.4
DDX39AO00148 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX39AO00148 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DDX39AO00148 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
DDX39AO00148 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX39AO00148 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
DDX39AO00148 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.79■■□□□ 1.4
DDX39AO00148 AC012676.1-201ENST00000574705 1949 ntBASIC23.78■■□□□ 1.4
DDX39AO00148 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
DDX39AO00148 AC061975.6-201ENST00000579045 1553 ntBASIC23.78■■□□□ 1.4
DDX39AO00148 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX39AO00148 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX39AO00148 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
DDX39AO00148 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
DDX39AO00148 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX39AO00148 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX39AO00148 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX39AO00148 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX39AO00148 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX39AO00148 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.78■■□□□ 1.4
DDX39AO00148 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
DDX39AO00148 AC008175.2-201ENST00000612840 297 ntBASIC23.78■■□□□ 1.4
DDX39AO00148 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX39AO00148 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX39AO00148 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DDX39AO00148 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.78■■□□□ 1.4
DDX39AO00148 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
DDX39AO00148 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX39AO00148 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX39AO00148 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX39AO00148 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
DDX39AO00148 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DDX39AO00148 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX39AO00148 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX39AO00148 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
DDX39AO00148 KRT18P20-201ENST00000548986 1279 ntBASIC23.77■■□□□ 1.4
DDX39AO00148 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.77■■□□□ 1.4
DDX39AO00148 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.77■■□□□ 1.4
DDX39AO00148 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms