Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 OXCT2P1-201ENST00000447263 1535 ntBASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
MEIS3P1A6NDR6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 AL049796.1-201ENST00000565336 1766 ntBASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 AL031848.2-201ENST00000607670 837 ntBASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MEIS3P1A6NDR6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
MEIS3P1A6NDR6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 AL499627.2-201ENST00000606283 725 ntBASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.05■□□□□ 0.48
MEIS3P1A6NDR6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 AL031602.1-201ENST00000633169 911 ntBASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.04■□□□□ 0.48
MEIS3P1A6NDR6 AFG3L1P-217ENST00000557444 2447 ntBASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 BX664725.1-201ENST00000438252 379 ntBASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 AL033527.3-201ENST00000566366 1196 ntBASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
MEIS3P1A6NDR6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
MEIS3P1A6NDR6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
MEIS3P1A6NDR6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.02■□□□□ 0.48
MEIS3P1A6NDR6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
MEIS3P1A6NDR6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
MEIS3P1A6NDR6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
MEIS3P1A6NDR6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms