Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV27A0A0K0K1C4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 OR2I1P-207ENST00000453522 948 ntBASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 MIR4787-201ENST00000607364 84 ntBASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV27A0A0K0K1C4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC14.93□□□□□ -0.02
TRBV27A0A0K0K1C4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRBV27A0A0K0K1C4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 AC073314.1-201ENST00000568729 2216 ntBASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRBV27A0A0K0K1C4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TRBV27A0A0K0K1C4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms