Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 SRD5A1P1-201ENST00000442297 786 ntBASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV5-5A0A0J9YX44 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 AP005435.1-201ENST00000529293 1178 ntBASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV5-5A0A0J9YX44 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV5-5A0A0J9YX44 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 PLK5-205ENST00000642079 1969 ntBASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
TRBV5-5A0A0J9YX44 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-5A0A0J9YX44 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TRBV5-5A0A0J9YX44 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-5A0A0J9YX44 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TRBV5-5A0A0J9YX44 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRBV5-5A0A0J9YX44 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TRBV5-5A0A0J9YX44 AC073314.1-201ENST00000568729 2216 ntBASIC18.33■□□□□ 0.53
TRBV5-5A0A0J9YX44 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.33■□□□□ 0.53
TRBV5-5A0A0J9YX44 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.33■□□□□ 0.53
TRBV5-5A0A0J9YX44 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 AL138724.1-201ENST00000606771 1088 ntBASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV5-5A0A0J9YX44 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.32■□□□□ 0.52
TRBV5-5A0A0J9YX44 AL512631.2-201ENST00000604634 923 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms