Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LMO3Q8TAP4 AC010307.3-202ENST00000515122 3142 ntTSL 2 BASIC11.73□□□□□ -0.53
LMO3Q8TAP4 STX17-201ENST00000259400 2713 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LMO3Q8TAP4 RPE-202ENST00000359429 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LMO3Q8TAP4 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 FMO1-202ENST00000367750 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AC104667.1-201ENST00000417947 2057 ntTSL 2 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 ARHGAP12-202ENST00000344936 4128 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 EFCAB8-201ENST00000400522 3961 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 THAP1-202ENST00000345117 1943 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AP002495.1-204ENST00000529844 1781 ntTSL 2 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 BCAS3-201ENST00000390652 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 WDR78-202ENST00000371023 1697 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 KIF9-201ENST00000265529 3311 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 ILK-210ENST00000528995 1559 ntTSL 2 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 DOCK2-201ENST00000256935 6097 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 MFN2-201ENST00000235329 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 MAP3K7CL-216ENST00000545939 1407 ntTSL 5 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 NPC1L1-202ENST00000381160 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 UQCRQ-202ENST00000378667 429 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 VTI1BP2-201ENST00000394154 696 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 PACRG-AS3-201ENST00000419182 1131 ntTSL 2 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 PIGUP1-201ENST00000423148 505 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 ANO7L1-201ENST00000442385 328 ntTSL 3 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 GSTM3P1-201ENST00000447621 574 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 CTSC-206ENST00000529974 747 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 PIGHP1-201ENST00000558833 565 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AC008870.4-201ENST00000561764 627 ntTSL 2 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AC135776.3-201ENST00000570988 427 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AC008738.4-201ENST00000590492 700 ntTSL 3 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AC011500.2-201ENST00000600089 440 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AL359643.3-201ENST00000606761 1086 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 RN7SL803P-201ENST00000607433 307 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AC009275.1-202ENST00000609209 889 ntTSL 5 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 Metazoa_SRP.85-201ENST00000610909 260 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 Metazoa_SRP.171-201ENST00000614579 289 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 Metazoa_SRP.88-201ENST00000615890 269 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AC092723.2-201ENST00000624955 793 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AC089987.1-202ENST00000641959 426 ntBASIC11.72□□□□□ -0.53
LMO3Q8TAP4 AL035681.1-201ENST00000441316 2500 ntTSL 2 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 ACTN1-201ENST00000193403 3779 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 FAM69A-205ENST00000616709 2426 ntTSL 3 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 ALKBH8-206ENST00000429370 2296 ntTSL 2 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 POLDIP3-203ENST00000348657 3323 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 ABLIM1-204ENST00000369256 3203 ntTSL 5 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 ACVR1-203ENST00000410057 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 RBMY1J-201ENST00000250831 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 MS4A7-201ENST00000300184 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 DCAF12-201ENST00000361264 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 POLH-202ENST00000372236 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 CBWD1-206ENST00000382393 1731 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 CCDC125-205ENST00000511257 1735 ntTSL 2 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
LMO3Q8TAP4 GYS1-201ENST00000263276 3378 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AC097532.2-201ENST00000608279 1682 ntBASIC11.71□□□□□ -0.53
LMO3Q8TAP4 CDH4-202ENST00000611855 3304 ntTSL 5 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 CX3CR1-205ENST00000541347 3255 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 HADHB-202ENST00000405867 1588 ntTSL 5 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 LINC00958-201ENST00000504230 1558 ntTSL 2 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 BAG6-236ENST00000375964 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 GPR55-201ENST00000392039 1523 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 SLC5A11-210ENST00000568579 2139 ntTSL 5 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 C12orf66-202ENST00000398055 4151 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 DENND2D-201ENST00000357640 2077 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 HMGCL-204ENST00000436439 1354 ntTSL 2 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 PTPN1-201ENST00000371621 4008 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 TRIM43B-201ENST00000432468 1341 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 WDR76-202ENST00000381246 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 CST4-201ENST00000217423 751 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AL022313.1-201ENST00000339367 444 ntBASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AC004832.6-202ENST00000366413 696 ntBASIC11.71□□□□□ -0.53
LMO3Q8TAP4 RCL1-203ENST00000381732 804 ntTSL 2 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 CAV3-202ENST00000397368 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AC097638.1-201ENST00000413663 515 ntBASIC11.71□□□□□ -0.53
LMO3Q8TAP4 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AL356488.1-201ENST00000429752 609 ntBASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AL353597.2-201ENST00000445172 735 ntTSL 2 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AL445489.1-201ENST00000458025 722 ntTSL 3 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 RN7SL210P-201ENST00000484688 288 ntBASIC11.71□□□□□ -0.53
LMO3Q8TAP4 LINC02107-201ENST00000513039 462 ntTSL 3 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 MIR2277-201ENST00000515916 93 ntBASIC11.71□□□□□ -0.53
LMO3Q8TAP4 FAM19A2-214ENST00000551449 580 ntTSL 4 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AC091544.2-201ENST00000555864 414 ntTSL 3 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AC012236.1-201ENST00000560812 680 ntTSL 3 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 BLOC1S6-208ENST00000565323 688 ntTSL 2 BASIC11.71□□□□□ -0.53
LMO3Q8TAP4 AC009081.1-201ENST00000567862 565 ntTSL 4 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms