Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 SUDS3P1-201ENST00000505831 966 ntBASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 AC105233.4-201ENST00000642045 216 ntBASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 AP006587.3-201ENST00000525742 1516 ntBASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDHGA11Q9Y5H2 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDHGA11Q9Y5H2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGA11Q9Y5H2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDHGA11Q9Y5H2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 MIR572-201ENST00000384983 95 ntBASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 AC003102.1-202ENST00000563394 1796 ntBASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 AC009237.3-201ENST00000393279 1427 ntBASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PCDHGA11Q9Y5H2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDHGA11Q9Y5H2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 Z98882.1-201ENST00000622160 2253 ntBASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 AC073130.3-201ENST00000624389 2278 ntBASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDHGA11Q9Y5H2 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 AC142381.2-201ENST00000566120 298 ntBASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 AC005229.4-201ENST00000610085 2198 ntBASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDHGA11Q9Y5H2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA11Q9Y5H2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDHGA11Q9Y5H2 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms