Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDHB11Q9Y5F2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PCDHB11Q9Y5F2 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB11Q9Y5F2 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB11Q9Y5F2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDHB11Q9Y5F2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.77■□□□□ 0.92
PCDHB11Q9Y5F2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDHB11Q9Y5F2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.77■□□□□ 0.92
PCDHB11Q9Y5F2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB11Q9Y5F2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDHB11Q9Y5F2 AC009237.3-201ENST00000393279 1427 ntBASIC20.77■□□□□ 0.91
PCDHB11Q9Y5F2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PCDHB11Q9Y5F2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 CDCA4P2-201ENST00000441182 718 ntBASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 AC006970.2-201ENST00000450065 779 ntBASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDHB11Q9Y5F2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 AP004607.4-201ENST00000530158 1459 ntBASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDHB11Q9Y5F2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDHB11Q9Y5F2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 AC004854.2-201ENST00000608450 1441 ntBASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 KRT18P11-201ENST00000435214 1283 ntBASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PCDHB11Q9Y5F2 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDHB11Q9Y5F2 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms