Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 AC137767.1-201ENST00000602918 1920 ntBASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
NRXN3Q9Y4C0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC30.14■■■□□ 2.41
NRXN3Q9Y4C0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.41
NRXN3Q9Y4C0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC30.14■■■□□ 2.41
NRXN3Q9Y4C0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 AC087742.1-201ENST00000575880 1738 ntBASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 AC128676.1-201ENST00000454392 318 ntBASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 AC008175.2-201ENST00000612840 297 ntBASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.13■■■□□ 2.41
NRXN3Q9Y4C0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 POU5F1P4-201ENST00000413175 1085 ntBASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 AC008403.3-201ENST00000598924 454 ntBASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
NRXN3Q9Y4C0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NRXN3Q9Y4C0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
NRXN3Q9Y4C0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC30.11■■■□□ 2.41
NRXN3Q9Y4C0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NRXN3Q9Y4C0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
NRXN3Q9Y4C0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
NRXN3Q9Y4C0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC30.11■■■□□ 2.41
NRXN3Q9Y4C0 AC026366.1-201ENST00000488803 879 ntBASIC30.11■■■□□ 2.41
NRXN3Q9Y4C0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
NRXN3Q9Y4C0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NRXN3Q9Y4C0 AC061975.6-201ENST00000579045 1553 ntBASIC30.1■■■□□ 2.41
NRXN3Q9Y4C0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
NRXN3Q9Y4C0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC30.1■■■□□ 2.41
NRXN3Q9Y4C0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30.1■■■□□ 2.41
NRXN3Q9Y4C0 AC142381.4-202ENST00000563973 229 ntBASIC30.1■■■□□ 2.41
NRXN3Q9Y4C0 USP36-216ENST00000589424 970 ntTSL 5 BASIC30.1■■■□□ 2.41
NRXN3Q9Y4C0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
NRXN3Q9Y4C0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 KRT17P1-201ENST00000399211 1546 ntBASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 AL158047.1-201ENST00000445918 881 ntBASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 OR2A1-AS1-201ENST00000462305 773 ntBASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
NRXN3Q9Y4C0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC30.08■■■□□ 2.41
NRXN3Q9Y4C0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
NRXN3Q9Y4C0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC30.08■■■□□ 2.41
NRXN3Q9Y4C0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC30.08■■■□□ 2.41
NRXN3Q9Y4C0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC30.08■■■□□ 2.41
NRXN3Q9Y4C0 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
NRXN3Q9Y4C0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
NRXN3Q9Y4C0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 UNC93B4-201ENST00000505679 747 ntBASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 AC073648.6-201ENST00000641589 218 ntBASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC30.07■■■□□ 2.4
NRXN3Q9Y4C0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 RHOD-202ENST00000532559 538 ntTSL 3 BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 AC120498.10-201ENST00000621827 505 ntBASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC30.06■■■□□ 2.4
NRXN3Q9Y4C0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
NRXN3Q9Y4C0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC30.05■■■□□ 2.4
NRXN3Q9Y4C0 SERPINH1P1-201ENST00000419794 1249 ntBASIC30.05■■■□□ 2.4
NRXN3Q9Y4C0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
NRXN3Q9Y4C0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms