Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.4■□□□□ 0.7
RPH3AQ9Y2J0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RPH3AQ9Y2J0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPH3AQ9Y2J0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPH3AQ9Y2J0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.7
RPH3AQ9Y2J0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPH3AQ9Y2J0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 AP006587.3-201ENST00000525742 1516 ntBASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RPH3AQ9Y2J0 C11orf96-202ENST00000528572 1834 ntBASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 AC055733.4-201ENST00000638462 1354 ntBASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RPH3AQ9Y2J0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 AC004854.2-201ENST00000608450 1441 ntBASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RPH3AQ9Y2J0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.35■□□□□ 0.69
RPH3AQ9Y2J0 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms