Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
ZC3H4Q9UPT8 LSM12P1-201ENST00000411836 588 ntBASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
ZC3H4Q9UPT8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ZC3H4Q9UPT8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
ZC3H4Q9UPT8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC25.89■■□□□ 1.74
ZC3H4Q9UPT8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.89■■□□□ 1.74
ZC3H4Q9UPT8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC25.89■■□□□ 1.74
ZC3H4Q9UPT8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
ZC3H4Q9UPT8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
ZC3H4Q9UPT8 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.89■■□□□ 1.74
ZC3H4Q9UPT8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ZC3H4Q9UPT8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ZC3H4Q9UPT8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
ZC3H4Q9UPT8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 AL034346.1-201ENST00000568244 1277 ntBASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 RN7SL471P-201ENST00000580476 299 ntBASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 AC243732.1-201ENST00000612648 864 ntBASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 AC008175.2-201ENST00000612840 297 ntBASIC25.88■■□□□ 1.73
ZC3H4Q9UPT8 RBM17P2-201ENST00000616397 1405 ntBASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 KRT17P3-201ENST00000420566 1262 ntBASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 AC012618.2-201ENST00000428058 849 ntBASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC25.87■■□□□ 1.73
ZC3H4Q9UPT8 AP004607.7-201ENST00000527152 1677 ntBASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 POU5F1P4-201ENST00000413175 1085 ntBASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ZC3H4Q9UPT8 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
ZC3H4Q9UPT8 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms