Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 AC092437.1-201ENST00000624794 1048 ntBASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PCDHA6Q9UN73 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA6Q9UN73 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA6Q9UN73 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA6Q9UN73 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA6Q9UN73 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
PCDHA6Q9UN73 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PCDHA6Q9UN73 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.36■■□□□ 1.49
PCDHA6Q9UN73 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.36■■□□□ 1.49
PCDHA6Q9UN73 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
PCDHA6Q9UN73 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 KRT19P1-201ENST00000405746 1186 ntBASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 AC104187.1-201ENST00000607510 612 ntBASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.35■■□□□ 1.49
PCDHA6Q9UN73 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PCDHA6Q9UN73 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA6Q9UN73 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
PCDHA6Q9UN73 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHA6Q9UN73 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHA6Q9UN73 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.33■■□□□ 1.49
PCDHA6Q9UN73 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
PCDHA6Q9UN73 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
PCDHA6Q9UN73 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
PCDHA6Q9UN73 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
PCDHA6Q9UN73 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 AL137784.2-201ENST00000607332 1000 ntBASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHA6Q9UN73 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 AC137761.2-201ENST00000561729 223 ntBASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 AC145350.3-201ENST00000569033 163 ntBASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.3■■□□□ 1.48
PCDHA6Q9UN73 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms