Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGC3Q9UN70 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHGC3Q9UN70 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 EEF1DP3-203ENST00000566025 782 ntBASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 AC007375.3-201ENST00000600936 2314 ntBASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGC3Q9UN70 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 TERF1P2-201ENST00000583350 1212 ntBASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.44■■□□□ 1.18
PCDHGC3Q9UN70 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 AC053503.5-201ENST00000601508 636 ntBASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGC3Q9UN70 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 AC079140.4-201ENST00000507448 529 ntBASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGC3Q9UN70 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCDHGC3Q9UN70 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 KRT87P-202ENST00000534226 1464 ntBASIC22.4■■□□□ 1.18
PCDHGC3Q9UN70 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC22.39■■□□□ 1.18
PCDHGC3Q9UN70 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGC3Q9UN70 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGC3Q9UN70 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGC3Q9UN70 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.39■■□□□ 1.17
PCDHGC3Q9UN70 CCDC92B-201ENST00000575506 885 ntBASIC22.39■■□□□ 1.17
PCDHGC3Q9UN70 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGC3Q9UN70 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGC3Q9UN70 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGC3Q9UN70 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
PCDHGC3Q9UN70 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDHGC3Q9UN70 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms