Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 GUSBP6-202ENST00000438529 1198 ntBASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LRIT1Q9P2V4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 AC068473.5-201ENST00000616428 2072 ntBASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 AC105036.2-201ENST00000569468 176 ntBASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 AC133552.2-202ENST00000575694 574 ntBASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LRIT1Q9P2V4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
LRIT1Q9P2V4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.52■□□□□ 0.88
LRIT1Q9P2V4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRIT1Q9P2V4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.52■□□□□ 0.88
LRIT1Q9P2V4 POU5F1P4-201ENST00000413175 1085 ntBASIC20.52■□□□□ 0.88
LRIT1Q9P2V4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.52■□□□□ 0.88
LRIT1Q9P2V4 AL138781.1-201ENST00000566567 1274 ntBASIC20.52■□□□□ 0.88
LRIT1Q9P2V4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.52■□□□□ 0.88
LRIT1Q9P2V4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRIT1Q9P2V4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LRIT1Q9P2V4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 AC133561.1-201ENST00000568600 2415 ntBASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 AC068338.2-201ENST00000563278 1430 ntBASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LRIT1Q9P2V4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRIT1Q9P2V4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 AC007322.4-201ENST00000509611 723 ntBASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 CD99P1-205ENST00000527459 561 ntBASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRIT1Q9P2V4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms