Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
VTA1Q9NP79 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.88■■□□□ 1.41
VTA1Q9NP79 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC23.88■■□□□ 1.41
VTA1Q9NP79 AC092118.2-201ENST00000613495 667 ntBASIC23.88■■□□□ 1.41
VTA1Q9NP79 TBCB-214ENST00000629269 413 ntTSL 5 BASIC23.88■■□□□ 1.41
VTA1Q9NP79 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
VTA1Q9NP79 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VTA1Q9NP79 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
VTA1Q9NP79 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.88■■□□□ 1.41
VTA1Q9NP79 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VTA1Q9NP79 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
VTA1Q9NP79 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
VTA1Q9NP79 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VTA1Q9NP79 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VTA1Q9NP79 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
VTA1Q9NP79 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
VTA1Q9NP79 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC23.87■■□□□ 1.41
VTA1Q9NP79 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.87■■□□□ 1.41
VTA1Q9NP79 AC243732.1-201ENST00000612648 864 ntBASIC23.87■■□□□ 1.41
VTA1Q9NP79 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
VTA1Q9NP79 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
VTA1Q9NP79 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.87■■□□□ 1.41
VTA1Q9NP79 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VTA1Q9NP79 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VTA1Q9NP79 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.86■■□□□ 1.41
VTA1Q9NP79 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.86■■□□□ 1.41
VTA1Q9NP79 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.86■■□□□ 1.41
VTA1Q9NP79 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VTA1Q9NP79 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
VTA1Q9NP79 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.86■■□□□ 1.41
VTA1Q9NP79 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VTA1Q9NP79 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
VTA1Q9NP79 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
VTA1Q9NP79 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
VTA1Q9NP79 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
VTA1Q9NP79 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
VTA1Q9NP79 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
VTA1Q9NP79 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.85■■□□□ 1.41
VTA1Q9NP79 FAM201B-201ENST00000458407 597 ntBASIC23.85■■□□□ 1.41
VTA1Q9NP79 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.85■■□□□ 1.41
VTA1Q9NP79 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC23.85■■□□□ 1.41
VTA1Q9NP79 AL591742.1-201ENST00000604433 565 ntBASIC23.85■■□□□ 1.41
VTA1Q9NP79 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
VTA1Q9NP79 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.85■■□□□ 1.41
VTA1Q9NP79 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.85■■□□□ 1.41
VTA1Q9NP79 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VTA1Q9NP79 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
VTA1Q9NP79 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.84■■□□□ 1.41
VTA1Q9NP79 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.84■■□□□ 1.41
VTA1Q9NP79 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VTA1Q9NP79 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
VTA1Q9NP79 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.84■■□□□ 1.41
VTA1Q9NP79 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VTA1Q9NP79 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.84■■□□□ 1.41
VTA1Q9NP79 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VTA1Q9NP79 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VTA1Q9NP79 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
VTA1Q9NP79 AC061975.6-201ENST00000579045 1553 ntBASIC23.83■■□□□ 1.41
VTA1Q9NP79 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VTA1Q9NP79 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VTA1Q9NP79 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
VTA1Q9NP79 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.83■■□□□ 1.41
VTA1Q9NP79 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VTA1Q9NP79 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
VTA1Q9NP79 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
VTA1Q9NP79 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.4
VTA1Q9NP79 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
VTA1Q9NP79 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.82■■□□□ 1.4
VTA1Q9NP79 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VTA1Q9NP79 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.82■■□□□ 1.4
VTA1Q9NP79 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.82■■□□□ 1.4
VTA1Q9NP79 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
VTA1Q9NP79 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VTA1Q9NP79 BX276092.2-201ENST00000417668 665 ntBASIC23.82■■□□□ 1.4
VTA1Q9NP79 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.82■■□□□ 1.4
VTA1Q9NP79 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
VTA1Q9NP79 AC003102.1-202ENST00000563394 1796 ntBASIC23.82■■□□□ 1.4
VTA1Q9NP79 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
VTA1Q9NP79 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VTA1Q9NP79 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VTA1Q9NP79 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VTA1Q9NP79 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.82■■□□□ 1.4
VTA1Q9NP79 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VTA1Q9NP79 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.81■■□□□ 1.4
VTA1Q9NP79 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.81■■□□□ 1.4
VTA1Q9NP79 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.81■■□□□ 1.4
VTA1Q9NP79 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.81■■□□□ 1.4
VTA1Q9NP79 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.81■■□□□ 1.4
VTA1Q9NP79 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
VTA1Q9NP79 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VTA1Q9NP79 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.81■■□□□ 1.4
VTA1Q9NP79 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
VTA1Q9NP79 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
VTA1Q9NP79 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.8■■□□□ 1.4
VTA1Q9NP79 RARRES2P4-201ENST00000514074 484 ntBASIC23.8■■□□□ 1.4
VTA1Q9NP79 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23.8■■□□□ 1.4
VTA1Q9NP79 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.8■■□□□ 1.4
VTA1Q9NP79 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.8■■□□□ 1.4
VTA1Q9NP79 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
VTA1Q9NP79 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms