Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLPBQ9H078 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CLPBQ9H078 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPBQ9H078 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.31■■□□□ 1
CLPBQ9H078 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPBQ9H078 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPBQ9H078 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.31■■□□□ 1
CLPBQ9H078 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPBQ9H078 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLPBQ9H078 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLPBQ9H078 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.31■■□□□ 1
CLPBQ9H078 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.31■■□□□ 1
CLPBQ9H078 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.31■■□□□ 1
CLPBQ9H078 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.31■■□□□ 1
CLPBQ9H078 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
CLPBQ9H078 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CLPBQ9H078 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CLPBQ9H078 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLPBQ9H078 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CLPBQ9H078 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.3■■□□□ 1
CLPBQ9H078 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLPBQ9H078 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.3■■□□□ 1
CLPBQ9H078 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.3■■□□□ 1
CLPBQ9H078 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.3■■□□□ 1
CLPBQ9H078 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLPBQ9H078 AP004607.7-201ENST00000527152 1677 ntBASIC21.3■■□□□ 1
CLPBQ9H078 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CLPBQ9H078 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.3■■□□□ 1
CLPBQ9H078 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.3■■□□□ 1
CLPBQ9H078 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CLPBQ9H078 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.29■■□□□ 1
CLPBQ9H078 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CLPBQ9H078 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CLPBQ9H078 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPBQ9H078 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLPBQ9H078 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPBQ9H078 AC006015.1-201ENST00000429970 570 ntBASIC21.29■■□□□ 1
CLPBQ9H078 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLPBQ9H078 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPBQ9H078 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.29■■□□□ 1
CLPBQ9H078 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CLPBQ9H078 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPBQ9H078 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLPBQ9H078 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CLPBQ9H078 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.28■■□□□ 1
CLPBQ9H078 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.28■■□□□ 1
CLPBQ9H078 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.28■■□□□ 1
CLPBQ9H078 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.28■■□□□ 1
CLPBQ9H078 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CLPBQ9H078 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.28■■□□□ 1
CLPBQ9H078 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.28■■□□□ 1
CLPBQ9H078 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLPBQ9H078 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLPBQ9H078 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLPBQ9H078 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CLPBQ9H078 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLPBQ9H078 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.27■■□□□ 1
CLPBQ9H078 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLPBQ9H078 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.27■■□□□ 1
CLPBQ9H078 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
CLPBQ9H078 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.27■■□□□ 1
CLPBQ9H078 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.27■■□□□ 1
CLPBQ9H078 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CLPBQ9H078 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.27■■□□□ 1
CLPBQ9H078 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.27■■□□□ 1
CLPBQ9H078 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CLPBQ9H078 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLPBQ9H078 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.27■■□□□ 1
CLPBQ9H078 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLPBQ9H078 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLPBQ9H078 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLPBQ9H078 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLPBQ9H078 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPBQ9H078 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.26■□□□□ 0.99
CLPBQ9H078 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPBQ9H078 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPBQ9H078 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPBQ9H078 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPBQ9H078 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLPBQ9H078 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
CLPBQ9H078 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.26■□□□□ 0.99
CLPBQ9H078 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.26■□□□□ 0.99
CLPBQ9H078 AC137761.2-201ENST00000561729 223 ntBASIC21.26■□□□□ 0.99
CLPBQ9H078 AC145350.3-201ENST00000569033 163 ntBASIC21.26■□□□□ 0.99
CLPBQ9H078 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.26■□□□□ 0.99
CLPBQ9H078 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.26■□□□□ 0.99
CLPBQ9H078 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPBQ9H078 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLPBQ9H078 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.25■□□□□ 0.99
CLPBQ9H078 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLPBQ9H078 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms