Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM3Q9BZL3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM3Q9BZL3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 MIR639-201ENST00000384974 98 ntBASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 AC120024.1-201ENST00000562672 995 ntBASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.28■□□□□ 0.36
SMIM3Q9BZL3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SMIM3Q9BZL3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 FP325331.1-202ENST00000623531 1380 ntBASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMIM3Q9BZL3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 AC104564.3-201ENST00000582367 638 ntBASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMIM3Q9BZL3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 AC022616.5-201ENST00000518796 181 ntBASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SMIM3Q9BZL3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 OXCT2P1-201ENST00000447263 1535 ntBASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMIM3Q9BZL3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms