Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CNTNAP3Q9BZ76 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 AL049637.2-201ENST00000641778 930 ntBASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CNTNAP3Q9BZ76 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 AC009237.3-201ENST00000393279 1427 ntBASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CNTNAP3Q9BZ76 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 AL355075.4-201ENST00000554988 638 ntBASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CNTNAP3Q9BZ76 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.27■□□□□ 0.83
CNTNAP3Q9BZ76 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
CNTNAP3Q9BZ76 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CNTNAP3Q9BZ76 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 ERN1-208ENST00000606895 2068 ntBASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 AC138907.5-202ENST00000569484 235 ntBASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 AC060766.5-201ENST00000590539 871 ntBASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 AL161729.1-201ENST00000604104 1402 ntBASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CNTNAP3Q9BZ76 LINC01529-204ENST00000636474 1715 ntBASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 EEF1DP3-203ENST00000566025 782 ntBASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CNTNAP3Q9BZ76 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.24■□□□□ 0.83
CNTNAP3Q9BZ76 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms