Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PCGF1Q9BSM1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 AC022517.1-201ENST00000592429 346 ntBASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCGF1Q9BSM1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
PCGF1Q9BSM1 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.71■□□□□ 0.42
PCGF1Q9BSM1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
PCGF1Q9BSM1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCGF1Q9BSM1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 IKBKGP1-201ENST00000612193 1073 ntBASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 OR7E47P-201ENST00000546390 1422 ntBASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.69■□□□□ 0.42
PCGF1Q9BSM1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 AC092053.2-201ENST00000640557 1818 ntBASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 AL137784.2-201ENST00000607332 1000 ntBASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PCGF1Q9BSM1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 AC079140.4-201ENST00000507448 529 ntBASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 AC139530.1-201ENST00000575312 1977 ntBASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCGF1Q9BSM1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms