Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
SLC6A7Q99884 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.39■□□□□ 0.54
SLC6A7Q99884 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SLC6A7Q99884 C17orf82-201ENST00000623772 1530 ntBASIC18.39■□□□□ 0.54
SLC6A7Q99884 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SLC6A7Q99884 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.39■□□□□ 0.53
SLC6A7Q99884 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A7Q99884 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A7Q99884 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A7Q99884 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A7Q99884 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A7Q99884 AC006455.2-201ENST00000429931 906 ntBASIC18.39■□□□□ 0.53
SLC6A7Q99884 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A7Q99884 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A7Q99884 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A7Q99884 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.39■□□□□ 0.53
SLC6A7Q99884 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SLC6A7Q99884 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A7Q99884 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A7Q99884 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A7Q99884 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SLC6A7Q99884 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A7Q99884 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A7Q99884 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A7Q99884 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A7Q99884 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.38■□□□□ 0.53
SLC6A7Q99884 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A7Q99884 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A7Q99884 AC241377.3-202ENST00000626088 1088 ntBASIC18.38■□□□□ 0.53
SLC6A7Q99884 AC241585.3-202ENST00000628937 1088 ntBASIC18.38■□□□□ 0.53
SLC6A7Q99884 AC245100.8-202ENST00000629247 1058 ntBASIC18.38■□□□□ 0.53
SLC6A7Q99884 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A7Q99884 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.38■□□□□ 0.53
SLC6A7Q99884 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SLC6A7Q99884 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 IRS3P-201ENST00000223076 1006 ntBASIC18.37■□□□□ 0.53
SLC6A7Q99884 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A7Q99884 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A7Q99884 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A7Q99884 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.37■□□□□ 0.53
SLC6A7Q99884 AC009086.3-201ENST00000623486 1008 ntBASIC18.37■□□□□ 0.53
SLC6A7Q99884 AC136469.2-201ENST00000623944 1028 ntBASIC18.37■□□□□ 0.53
SLC6A7Q99884 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC6A7Q99884 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SLC6A7Q99884 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.37■□□□□ 0.53
SLC6A7Q99884 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A7Q99884 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A7Q99884 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A7Q99884 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.36■□□□□ 0.53
SLC6A7Q99884 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SLC6A7Q99884 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SLC6A7Q99884 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A7Q99884 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A7Q99884 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A7Q99884 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A7Q99884 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC6A7Q99884 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A7Q99884 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SLC6A7Q99884 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.36■□□□□ 0.53
SLC6A7Q99884 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SLC6A7Q99884 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SLC6A7Q99884 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SLC6A7Q99884 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 AL162430.1-201ENST00000480705 870 ntBASIC18.35■□□□□ 0.53
SLC6A7Q99884 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 AL157384.1-201ENST00000445995 2473 ntBASIC18.35■□□□□ 0.53
SLC6A7Q99884 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.35■□□□□ 0.53
SLC6A7Q99884 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SLC6A7Q99884 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A7Q99884 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.34■□□□□ 0.53
SLC6A7Q99884 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SLC6A7Q99884 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms