Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.51■■□□□ 1.03
PHOX2BQ99453 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PHOX2BQ99453 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHOX2BQ99453 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.51■■□□□ 1.03
PHOX2BQ99453 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.51■■□□□ 1.03
PHOX2BQ99453 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.51■■□□□ 1.03
PHOX2BQ99453 AC069236.1-201ENST00000604339 616 ntBASIC21.51■■□□□ 1.03
PHOX2BQ99453 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PHOX2BQ99453 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHOX2BQ99453 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.5■■□□□ 1.03
PHOX2BQ99453 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PHOX2BQ99453 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PHOX2BQ99453 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PHOX2BQ99453 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.5■■□□□ 1.03
PHOX2BQ99453 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PHOX2BQ99453 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.5■■□□□ 1.03
PHOX2BQ99453 AC087499.1-201ENST00000418141 1075 ntBASIC21.5■■□□□ 1.03
PHOX2BQ99453 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PHOX2BQ99453 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.5■■□□□ 1.03
PHOX2BQ99453 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.5■■□□□ 1.03
PHOX2BQ99453 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.5■■□□□ 1.03
PHOX2BQ99453 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.49■■□□□ 1.03
PHOX2BQ99453 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHOX2BQ99453 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHOX2BQ99453 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PHOX2BQ99453 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PHOX2BQ99453 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PHOX2BQ99453 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.49■■□□□ 1.03
PHOX2BQ99453 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PHOX2BQ99453 TMPOP1-202ENST00000424642 1267 ntBASIC21.49■■□□□ 1.03
PHOX2BQ99453 TSPY15P-201ENST00000457163 923 ntBASIC21.49■■□□□ 1.03
PHOX2BQ99453 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.49■■□□□ 1.03
PHOX2BQ99453 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.49■■□□□ 1.03
PHOX2BQ99453 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 TSPY7P-201ENST00000431358 1114 ntBASIC21.48■■□□□ 1.03
PHOX2BQ99453 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.48■■□□□ 1.03
PHOX2BQ99453 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PHOX2BQ99453 LINC01124-201ENST00000409786 2117 ntBASIC21.47■■□□□ 1.03
PHOX2BQ99453 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.47■■□□□ 1.03
PHOX2BQ99453 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PHOX2BQ99453 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
PHOX2BQ99453 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.47■■□□□ 1.03
PHOX2BQ99453 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.47■■□□□ 1.03
PHOX2BQ99453 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PHOX2BQ99453 AC010141.2-201ENST00000452426 721 ntBASIC21.47■■□□□ 1.03
PHOX2BQ99453 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.47■■□□□ 1.03
PHOX2BQ99453 AC007322.4-201ENST00000509611 723 ntBASIC21.47■■□□□ 1.03
PHOX2BQ99453 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.47■■□□□ 1.03
PHOX2BQ99453 RN7SL850P-201ENST00000579959 291 ntBASIC21.47■■□□□ 1.03
PHOX2BQ99453 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.47■■□□□ 1.03
PHOX2BQ99453 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.47■■□□□ 1.03
PHOX2BQ99453 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PHOX2BQ99453 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHOX2BQ99453 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PHOX2BQ99453 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHOX2BQ99453 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHOX2BQ99453 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.46■■□□□ 1.03
PHOX2BQ99453 AC068587.7-201ENST00000641602 218 ntBASIC21.46■■□□□ 1.03
PHOX2BQ99453 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PHOX2BQ99453 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.45■■□□□ 1.03
PHOX2BQ99453 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.45■■□□□ 1.03
PHOX2BQ99453 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PHOX2BQ99453 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PHOX2BQ99453 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHOX2BQ99453 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHOX2BQ99453 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 KRT18P20-201ENST00000548986 1279 ntBASIC21.45■■□□□ 1.02
PHOX2BQ99453 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 AC012306.2-201ENST00000609350 630 ntBASIC21.45■■□□□ 1.02
PHOX2BQ99453 AC097493.4-201ENST00000641197 219 ntBASIC21.45■■□□□ 1.02
PHOX2BQ99453 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PHOX2BQ99453 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PHOX2BQ99453 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.45■■□□□ 1.02
PHOX2BQ99453 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.44■■□□□ 1.02
PHOX2BQ99453 AC144652.1-201ENST00000609974 1624 ntBASIC21.44■■□□□ 1.02
PHOX2BQ99453 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms