Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC090192.1-201ENST00000517740 490 ntBASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDK5RAP1Q96SZ6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDK5RAP1Q96SZ6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDK5RAP1Q96SZ6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDK5RAP1Q96SZ6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.05■■□□□ 1.12
CDK5RAP1Q96SZ6 AC012676.1-201ENST00000574705 1949 ntBASIC22.05■■□□□ 1.12
CDK5RAP1Q96SZ6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CDK5RAP1Q96SZ6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.05■■□□□ 1.12
CDK5RAP1Q96SZ6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
CDK5RAP1Q96SZ6 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDK5RAP1Q96SZ6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 ECEL1P1-201ENST00000373592 1742 ntBASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 MFSD11-216ENST00000590393 1141 ntBASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDK5RAP1Q96SZ6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 AC073111.5-205ENST00000641717 521 ntBASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDK5RAP1Q96SZ6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDK5RAP1Q96SZ6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.11
CDK5RAP1Q96SZ6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
CDK5RAP1Q96SZ6 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 KRT16P2-201ENST00000414673 1423 ntBASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 CDCA4P2-201ENST00000441182 718 ntBASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.01■■□□□ 1.11
CDK5RAP1Q96SZ6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CDK5RAP1Q96SZ6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms