Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.8■■□□□ 1.24
CASD1Q96PB1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.8■■□□□ 1.24
CASD1Q96PB1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.8■■□□□ 1.24
CASD1Q96PB1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 AC092118.2-201ENST00000613495 667 ntBASIC22.8■■□□□ 1.24
CASD1Q96PB1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.8■■□□□ 1.24
CASD1Q96PB1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
CASD1Q96PB1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CASD1Q96PB1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.79■■□□□ 1.24
CASD1Q96PB1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CASD1Q96PB1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
CASD1Q96PB1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CASD1Q96PB1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.79■■□□□ 1.24
CASD1Q96PB1 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.79■■□□□ 1.24
CASD1Q96PB1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.79■■□□□ 1.24
CASD1Q96PB1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.79■■□□□ 1.24
CASD1Q96PB1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CASD1Q96PB1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CASD1Q96PB1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
CASD1Q96PB1 AC061975.6-201ENST00000579045 1553 ntBASIC22.79■■□□□ 1.24
CASD1Q96PB1 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.79■■□□□ 1.24
CASD1Q96PB1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CASD1Q96PB1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CASD1Q96PB1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.79■■□□□ 1.24
CASD1Q96PB1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CASD1Q96PB1 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.78■■□□□ 1.24
CASD1Q96PB1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.78■■□□□ 1.24
CASD1Q96PB1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CASD1Q96PB1 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.78■■□□□ 1.24
CASD1Q96PB1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CASD1Q96PB1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CASD1Q96PB1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
CASD1Q96PB1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CASD1Q96PB1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.77■■□□□ 1.24
CASD1Q96PB1 AC003102.1-202ENST00000563394 1796 ntBASIC22.77■■□□□ 1.24
CASD1Q96PB1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.77■■□□□ 1.24
CASD1Q96PB1 BX276092.2-201ENST00000417668 665 ntBASIC22.77■■□□□ 1.24
CASD1Q96PB1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.77■■□□□ 1.24
CASD1Q96PB1 RNA5SP413-201ENST00000516373 109 ntBASIC22.77■■□□□ 1.24
CASD1Q96PB1 AL162412.1-201ENST00000567129 965 ntBASIC22.77■■□□□ 1.24
CASD1Q96PB1 AL591742.1-201ENST00000604433 565 ntBASIC22.77■■□□□ 1.24
CASD1Q96PB1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
CASD1Q96PB1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CASD1Q96PB1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
CASD1Q96PB1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASD1Q96PB1 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASD1Q96PB1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASD1Q96PB1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
CASD1Q96PB1 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.23
CASD1Q96PB1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CASD1Q96PB1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.76■■□□□ 1.23
CASD1Q96PB1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASD1Q96PB1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.76■■□□□ 1.23
CASD1Q96PB1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC22.76■■□□□ 1.23
CASD1Q96PB1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.76■■□□□ 1.23
CASD1Q96PB1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC22.76■■□□□ 1.23
CASD1Q96PB1 AC243732.1-201ENST00000612648 864 ntBASIC22.76■■□□□ 1.23
CASD1Q96PB1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
CASD1Q96PB1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.76■■□□□ 1.23
CASD1Q96PB1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
CASD1Q96PB1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.76■■□□□ 1.23
CASD1Q96PB1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
CASD1Q96PB1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CASD1Q96PB1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CASD1Q96PB1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CASD1Q96PB1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CASD1Q96PB1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.75■■□□□ 1.23
CASD1Q96PB1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
CASD1Q96PB1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.75■■□□□ 1.23
CASD1Q96PB1 POU5F1P3-201ENST00000428824 1078 ntBASIC22.75■■□□□ 1.23
CASD1Q96PB1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.75■■□□□ 1.23
CASD1Q96PB1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
CASD1Q96PB1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.75■■□□□ 1.23
CASD1Q96PB1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CASD1Q96PB1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
CASD1Q96PB1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.75■■□□□ 1.23
CASD1Q96PB1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.74■■□□□ 1.23
CASD1Q96PB1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CASD1Q96PB1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CASD1Q96PB1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.74■■□□□ 1.23
CASD1Q96PB1 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.74■■□□□ 1.23
CASD1Q96PB1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CASD1Q96PB1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CASD1Q96PB1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CASD1Q96PB1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
CASD1Q96PB1 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CASD1Q96PB1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CASD1Q96PB1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.73■■□□□ 1.23
CASD1Q96PB1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.73■■□□□ 1.23
CASD1Q96PB1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
CASD1Q96PB1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CASD1Q96PB1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CASD1Q96PB1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms