Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 AC099791.1-201ENST00000416440 715 ntBASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 AC233992.3-201ENST00000607491 485 ntBASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 AC092666.2-201ENST00000613287 246 ntBASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN4Q96NZ1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 MIR5787-201ENST00000611784 55 ntBASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN4Q96NZ1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
FOXN4Q96NZ1 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
FOXN4Q96NZ1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXN4Q96NZ1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXN4Q96NZ1 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXN4Q96NZ1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms