Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 AP004607.7-201ENST00000527152 1677 ntBASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBGCP3Q96CW5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 SYT6-210ENST00000641643 1587 ntBASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TUBGCP3Q96CW5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.52■□□□□ 0.88
TUBGCP3Q96CW5 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TUBGCP3Q96CW5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBGCP3Q96CW5 SERBP1P1-201ENST00000396021 1160 ntBASIC20.52■□□□□ 0.88
TUBGCP3Q96CW5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.52■□□□□ 0.88
TUBGCP3Q96CW5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TUBGCP3Q96CW5 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBGCP3Q96CW5 AL157384.1-201ENST00000445995 2473 ntBASIC20.52■□□□□ 0.88
TUBGCP3Q96CW5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TUBGCP3Q96CW5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TUBGCP3Q96CW5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TUBGCP3Q96CW5 AC003102.1-202ENST00000563394 1796 ntBASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 AC073130.3-201ENST00000624389 2278 ntBASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 AL138724.1-201ENST00000606771 1088 ntBASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TUBGCP3Q96CW5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.5■□□□□ 0.87
TUBGCP3Q96CW5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 DUX4L19-201ENST00000557448 1267 ntBASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.49■□□□□ 0.87
TUBGCP3Q96CW5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.48■□□□□ 0.87
TUBGCP3Q96CW5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms