Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AP004607.4-201ENST00000530158 1459 ntBASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.95■□□□□ 0.94
SH3KBP1Q96B97 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 AL034346.1-201ENST00000568244 1277 ntBASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 AC092437.1-201ENST00000624794 1048 ntBASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SH3KBP1Q96B97 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 AC016769.1-201ENST00000409132 1010 ntBASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 AC004911.1-201ENST00000416316 871 ntBASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 AC137761.2-201ENST00000561729 223 ntBASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 AC145350.3-201ENST00000569033 163 ntBASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 RARRES2P11-201ENST00000635158 484 ntBASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SH3KBP1Q96B97 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 AC004854.2-201ENST00000608450 1441 ntBASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SH3KBP1Q96B97 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SH3KBP1Q96B97 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.9■□□□□ 0.94
SH3KBP1Q96B97 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
SH3KBP1Q96B97 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH3KBP1Q96B97 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SH3KBP1Q96B97 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SH3KBP1Q96B97 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.89■□□□□ 0.94
SH3KBP1Q96B97 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SH3KBP1Q96B97 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms