Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC244015.2-201ENST00000616358 1861 ntBASIC27.38■■□□□ 1.97
ZNF428Q96B54 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ZNF428Q96B54 TUB-203ENST00000534099 1759 ntTSL 2 BASIC27.37■■□□□ 1.97
ZNF428Q96B54 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC27.37■■□□□ 1.97
ZNF428Q96B54 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC27.37■■□□□ 1.97
ZNF428Q96B54 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC27.37■■□□□ 1.97
ZNF428Q96B54 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
ZNF428Q96B54 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF428Q96B54 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF428Q96B54 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.36■■□□□ 1.97
ZNF428Q96B54 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
ZNF428Q96B54 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF428Q96B54 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF428Q96B54 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF428Q96B54 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF428Q96B54 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.36■■□□□ 1.97
ZNF428Q96B54 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC27.36■■□□□ 1.97
ZNF428Q96B54 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC27.36■■□□□ 1.97
ZNF428Q96B54 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF428Q96B54 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ZNF428Q96B54 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZNF428Q96B54 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ZNF428Q96B54 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZNF428Q96B54 AC016769.1-201ENST00000409132 1010 ntBASIC27.35■■□□□ 1.97
ZNF428Q96B54 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC27.35■■□□□ 1.97
ZNF428Q96B54 AC080038.1-201ENST00000611274 1154 ntBASIC27.35■■□□□ 1.97
ZNF428Q96B54 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC27.35■■□□□ 1.97
ZNF428Q96B54 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
ZNF428Q96B54 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
ZNF428Q96B54 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.35■■□□□ 1.97
ZNF428Q96B54 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF428Q96B54 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF428Q96B54 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF428Q96B54 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
ZNF428Q96B54 AC011767.1-201ENST00000617410 1153 ntBASIC27.34■■□□□ 1.97
ZNF428Q96B54 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ZNF428Q96B54 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC27.34■■□□□ 1.97
ZNF428Q96B54 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF428Q96B54 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.33■■□□□ 1.97
ZNF428Q96B54 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF428Q96B54 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF428Q96B54 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.33■■□□□ 1.97
ZNF428Q96B54 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF428Q96B54 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.33■■□□□ 1.97
ZNF428Q96B54 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF428Q96B54 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF428Q96B54 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF428Q96B54 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF428Q96B54 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
ZNF428Q96B54 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
ZNF428Q96B54 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC27.33■■□□□ 1.96
ZNF428Q96B54 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.33■■□□□ 1.96
ZNF428Q96B54 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
ZNF428Q96B54 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC27.32■■□□□ 1.96
ZNF428Q96B54 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC27.32■■□□□ 1.96
ZNF428Q96B54 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC27.32■■□□□ 1.96
ZNF428Q96B54 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
ZNF428Q96B54 FBXW4P1-201ENST00000426721 2239 ntBASIC27.32■■□□□ 1.96
ZNF428Q96B54 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF428Q96B54 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF428Q96B54 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF428Q96B54 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC27.31■■□□□ 1.96
ZNF428Q96B54 AC006015.1-201ENST00000429970 570 ntBASIC27.31■■□□□ 1.96
ZNF428Q96B54 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC27.31■■□□□ 1.96
ZNF428Q96B54 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
ZNF428Q96B54 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF428Q96B54 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
ZNF428Q96B54 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ZNF428Q96B54 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC27.3■■□□□ 1.96
ZNF428Q96B54 AC079140.4-201ENST00000507448 529 ntBASIC27.3■■□□□ 1.96
ZNF428Q96B54 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZNF428Q96B54 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.3■■□□□ 1.96
ZNF428Q96B54 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ZNF428Q96B54 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ZNF428Q96B54 MFF-203ENST00000349901 1716 ntTSL 2 BASIC27.3■■□□□ 1.96
ZNF428Q96B54 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC27.29■■□□□ 1.96
ZNF428Q96B54 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 CDCA4P2-201ENST00000441182 718 ntBASIC27.29■■□□□ 1.96
ZNF428Q96B54 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 EEF1DP3-203ENST00000566025 782 ntBASIC27.29■■□□□ 1.96
ZNF428Q96B54 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC27.29■■□□□ 1.96
ZNF428Q96B54 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
ZNF428Q96B54 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
ZNF428Q96B54 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC27.29■■□□□ 1.96
ZNF428Q96B54 ME2-206ENST00000638410 2289 ntTSL 5 BASIC27.29■■□□□ 1.96
ZNF428Q96B54 ME2-210ENST00000639255 2262 ntTSL 5 BASIC27.29■■□□□ 1.96
ZNF428Q96B54 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC27.28■■□□□ 1.96
ZNF428Q96B54 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC27.28■■□□□ 1.96
ZNF428Q96B54 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
ZNF428Q96B54 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms