Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 C2orf69P4-201ENST00000565394 541 ntBASIC18.71■□□□□ 0.59
USP9XQ93008 SOX15-203ENST00000570788 1093 ntBASIC18.71■□□□□ 0.59
USP9XQ93008 AC233702.5-201ENST00000584107 538 ntBASIC18.71■□□□□ 0.59
USP9XQ93008 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.71■□□□□ 0.59
USP9XQ93008 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.71■□□□□ 0.59
USP9XQ93008 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
USP9XQ93008 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
USP9XQ93008 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.71■□□□□ 0.59
USP9XQ93008 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.71■□□□□ 0.59
USP9XQ93008 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
USP9XQ93008 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP9XQ93008 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP9XQ93008 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.7■□□□□ 0.58
USP9XQ93008 KRT16P2-201ENST00000414673 1423 ntBASIC18.7■□□□□ 0.58
USP9XQ93008 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP9XQ93008 KRT17P1-201ENST00000399211 1546 ntBASIC18.7■□□□□ 0.58
USP9XQ93008 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP9XQ93008 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
USP9XQ93008 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
USP9XQ93008 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP9XQ93008 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP9XQ93008 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.69■□□□□ 0.58
USP9XQ93008 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP9XQ93008 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.69■□□□□ 0.58
USP9XQ93008 KRT18P35-201ENST00000510488 1269 ntBASIC18.69■□□□□ 0.58
USP9XQ93008 AC060766.5-201ENST00000590539 871 ntBASIC18.69■□□□□ 0.58
USP9XQ93008 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
USP9XQ93008 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP9XQ93008 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
USP9XQ93008 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP9XQ93008 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP9XQ93008 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP9XQ93008 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP9XQ93008 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP9XQ93008 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP9XQ93008 AC133561.5-201ENST00000635547 218 ntBASIC18.69■□□□□ 0.58
USP9XQ93008 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.68■□□□□ 0.58
USP9XQ93008 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.68■□□□□ 0.58
USP9XQ93008 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP9XQ93008 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP9XQ93008 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP9XQ93008 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
USP9XQ93008 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.68■□□□□ 0.58
USP9XQ93008 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP9XQ93008 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP9XQ93008 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP9XQ93008 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.67■□□□□ 0.58
USP9XQ93008 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP9XQ93008 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.67■□□□□ 0.58
USP9XQ93008 RN7SL471P-201ENST00000580476 299 ntBASIC18.67■□□□□ 0.58
USP9XQ93008 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.67■□□□□ 0.58
USP9XQ93008 AL591742.1-201ENST00000604433 565 ntBASIC18.67■□□□□ 0.58
USP9XQ93008 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP9XQ93008 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP9XQ93008 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP9XQ93008 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
USP9XQ93008 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP9XQ93008 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.67■□□□□ 0.58
USP9XQ93008 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.67■□□□□ 0.58
USP9XQ93008 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.67■□□□□ 0.58
USP9XQ93008 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.67■□□□□ 0.58
USP9XQ93008 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP9XQ93008 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.66■□□□□ 0.58
USP9XQ93008 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
USP9XQ93008 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
USP9XQ93008 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP9XQ93008 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP9XQ93008 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
USP9XQ93008 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP9XQ93008 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP9XQ93008 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP9XQ93008 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP9XQ93008 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP9XQ93008 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP9XQ93008 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.66■□□□□ 0.58
USP9XQ93008 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP9XQ93008 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
USP9XQ93008 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.66■□□□□ 0.58
USP9XQ93008 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.66■□□□□ 0.58
USP9XQ93008 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.66■□□□□ 0.58
USP9XQ93008 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.66■□□□□ 0.58
USP9XQ93008 AP003733.4-201ENST00000623785 1697 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms