Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.21■■□□□ 1.31
TMEM40Q8WWA1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 AC092053.2-201ENST00000640557 1818 ntBASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 AC007322.4-201ENST00000509611 723 ntBASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 AC008175.2-201ENST00000612840 297 ntBASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.2■■□□□ 1.3
TMEM40Q8WWA1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 AC061975.6-201ENST00000579045 1553 ntBASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 CD99P1-205ENST00000527459 561 ntBASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
TMEM40Q8WWA1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 AC127496.7-201ENST00000625110 1798 ntBASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.18■■□□□ 1.3
TMEM40Q8WWA1 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 POU5F1P4-201ENST00000413175 1085 ntBASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 AC069152.1-201ENST00000438030 544 ntBASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
TMEM40Q8WWA1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 AC093787.1-201ENST00000450396 207 ntBASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 KRT18P6-201ENST00000555540 1265 ntBASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
TMEM40Q8WWA1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
TMEM40Q8WWA1 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM40Q8WWA1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM40Q8WWA1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.15■■□□□ 1.3
TMEM40Q8WWA1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.15■■□□□ 1.3
TMEM40Q8WWA1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
TMEM40Q8WWA1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
TMEM40Q8WWA1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.15■■□□□ 1.3
TMEM40Q8WWA1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.14■■□□□ 1.3
TMEM40Q8WWA1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
TMEM40Q8WWA1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
TMEM40Q8WWA1 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
TMEM40Q8WWA1 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.14■■□□□ 1.3
TMEM40Q8WWA1 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 AC120498.10-201ENST00000621827 505 ntBASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 KRT16P2-201ENST00000414673 1423 ntBASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 RBM17P2-201ENST00000616397 1405 ntBASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.14■■□□□ 1.29
TMEM40Q8WWA1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms