Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTL9Q8NET4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RTL9Q8NET4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RTL9Q8NET4 AC003102.1-202ENST00000563394 1796 ntBASIC26.26■■□□□ 1.79
RTL9Q8NET4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.26■■□□□ 1.79
RTL9Q8NET4 AC092053.2-201ENST00000640557 1818 ntBASIC26.26■■□□□ 1.79
RTL9Q8NET4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.26■■□□□ 1.79
RTL9Q8NET4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTL9Q8NET4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RTL9Q8NET4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC26.26■■□□□ 1.79
RTL9Q8NET4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.26■■□□□ 1.79
RTL9Q8NET4 AC120498.10-201ENST00000621827 505 ntBASIC26.26■■□□□ 1.79
RTL9Q8NET4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
RTL9Q8NET4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26.26■■□□□ 1.79
RTL9Q8NET4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC26.26■■□□□ 1.79
RTL9Q8NET4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.26■■□□□ 1.79
RTL9Q8NET4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTL9Q8NET4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTL9Q8NET4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RTL9Q8NET4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RTL9Q8NET4 SLC29A4P1-201ENST00000398760 971 ntBASIC26.25■■□□□ 1.79
RTL9Q8NET4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.25■■□□□ 1.79
RTL9Q8NET4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
RTL9Q8NET4 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.25■■□□□ 1.79
RTL9Q8NET4 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.25■■□□□ 1.79
RTL9Q8NET4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL9Q8NET4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.25■■□□□ 1.79
RTL9Q8NET4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RTL9Q8NET4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC26.25■■□□□ 1.79
RTL9Q8NET4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
RTL9Q8NET4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.25■■□□□ 1.79
RTL9Q8NET4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTL9Q8NET4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
RTL9Q8NET4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTL9Q8NET4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.24■■□□□ 1.79
RTL9Q8NET4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.24■■□□□ 1.79
RTL9Q8NET4 RBM17P2-201ENST00000616397 1405 ntBASIC26.24■■□□□ 1.79
RTL9Q8NET4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTL9Q8NET4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC26.24■■□□□ 1.79
RTL9Q8NET4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RTL9Q8NET4 AC105036.2-201ENST00000569468 176 ntBASIC26.24■■□□□ 1.79
RTL9Q8NET4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.24■■□□□ 1.79
RTL9Q8NET4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RTL9Q8NET4 AC243732.1-201ENST00000612648 864 ntBASIC26.24■■□□□ 1.79
RTL9Q8NET4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
RTL9Q8NET4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTL9Q8NET4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC26.23■■□□□ 1.79
RTL9Q8NET4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC26.23■■□□□ 1.79
RTL9Q8NET4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC26.23■■□□□ 1.79
RTL9Q8NET4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.23■■□□□ 1.79
RTL9Q8NET4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTL9Q8NET4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTL9Q8NET4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RTL9Q8NET4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTL9Q8NET4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTL9Q8NET4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
RTL9Q8NET4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTL9Q8NET4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RTL9Q8NET4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTL9Q8NET4 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
RTL9Q8NET4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL9Q8NET4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC26.22■■□□□ 1.79
RTL9Q8NET4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
RTL9Q8NET4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTL9Q8NET4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC26.22■■□□□ 1.79
RTL9Q8NET4 AL162412.1-201ENST00000567129 965 ntBASIC26.22■■□□□ 1.79
RTL9Q8NET4 OR10C1-204ENST00000622521 1039 ntBASIC26.22■■□□□ 1.79
RTL9Q8NET4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC26.22■■□□□ 1.79
RTL9Q8NET4 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC26.22■■□□□ 1.79
RTL9Q8NET4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
RTL9Q8NET4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL9Q8NET4 AC080038.3-201ENST00000623346 1952 ntBASIC26.22■■□□□ 1.79
RTL9Q8NET4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL9Q8NET4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RTL9Q8NET4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL9Q8NET4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RTL9Q8NET4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.21■■□□□ 1.79
RTL9Q8NET4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RTL9Q8NET4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTL9Q8NET4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.79
RTL9Q8NET4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.2■■□□□ 1.79
RTL9Q8NET4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC26.2■■□□□ 1.79
RTL9Q8NET4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTL9Q8NET4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.2■■□□□ 1.79
RTL9Q8NET4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.2■■□□□ 1.79
RTL9Q8NET4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
RTL9Q8NET4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTL9Q8NET4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTL9Q8NET4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RTL9Q8NET4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC26.2■■□□□ 1.78
RTL9Q8NET4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTL9Q8NET4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
RTL9Q8NET4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RTL9Q8NET4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTL9Q8NET4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RTL9Q8NET4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.2■■□□□ 1.78
RTL9Q8NET4 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC26.2■■□□□ 1.78
RTL9Q8NET4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
RTL9Q8NET4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RTL9Q8NET4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms