Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.71■■□□□ 1.07
KDM1BQ8NB78 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM1BQ8NB78 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM1BQ8NB78 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM1BQ8NB78 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.71■■□□□ 1.07
KDM1BQ8NB78 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.71■■□□□ 1.07
KDM1BQ8NB78 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDM1BQ8NB78 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 AP001160.3-201ENST00000601484 763 ntBASIC21.7■■□□□ 1.06
KDM1BQ8NB78 AC073111.5-205ENST00000641717 521 ntBASIC21.7■■□□□ 1.06
KDM1BQ8NB78 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDM1BQ8NB78 AC007375.3-201ENST00000600936 2314 ntBASIC21.69■■□□□ 1.06
KDM1BQ8NB78 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 CDCA4P2-201ENST00000441182 718 ntBASIC21.69■■□□□ 1.06
KDM1BQ8NB78 KRT18P20-201ENST00000548986 1279 ntBASIC21.69■■□□□ 1.06
KDM1BQ8NB78 EEF1DP3-203ENST00000566025 782 ntBASIC21.69■■□□□ 1.06
KDM1BQ8NB78 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.69■■□□□ 1.06
KDM1BQ8NB78 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 AC053503.5-201ENST00000601508 636 ntBASIC21.68■■□□□ 1.06
KDM1BQ8NB78 AC011767.1-201ENST00000617410 1153 ntBASIC21.68■■□□□ 1.06
KDM1BQ8NB78 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
KDM1BQ8NB78 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 AC080038.3-201ENST00000623346 1952 ntBASIC21.67■■□□□ 1.06
KDM1BQ8NB78 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 AC010141.2-201ENST00000452426 721 ntBASIC21.67■■□□□ 1.06
KDM1BQ8NB78 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.67■■□□□ 1.06
KDM1BQ8NB78 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 AC026185.1-201ENST00000445748 174 ntBASIC21.66■■□□□ 1.06
KDM1BQ8NB78 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
KDM1BQ8NB78 AC092053.2-201ENST00000640557 1818 ntBASIC21.66■■□□□ 1.06
KDM1BQ8NB78 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms