Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAM1L1Q8N609 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 AC010141.2-201ENST00000452426 721 ntBASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAM1L1Q8N609 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAM1L1Q8N609 AC079834.2-201ENST00000609776 1949 ntBASIC21.02■□□□□ 0.95
TRAM1L1Q8N609 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAM1L1Q8N609 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAM1L1Q8N609 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAM1L1Q8N609 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRAM1L1Q8N609 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAM1L1Q8N609 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.01■□□□□ 0.95
TRAM1L1Q8N609 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
TRAM1L1Q8N609 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
TRAM1L1Q8N609 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAM1L1Q8N609 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAM1L1Q8N609 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAM1L1Q8N609 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRAM1L1Q8N609 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21■□□□□ 0.95
TRAM1L1Q8N609 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21■□□□□ 0.95
TRAM1L1Q8N609 AC022517.1-201ENST00000592429 346 ntBASIC21■□□□□ 0.95
TRAM1L1Q8N609 AP001160.3-201ENST00000601484 763 ntBASIC21■□□□□ 0.95
TRAM1L1Q8N609 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21■□□□□ 0.95
TRAM1L1Q8N609 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21■□□□□ 0.95
TRAM1L1Q8N609 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21■□□□□ 0.95
TRAM1L1Q8N609 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAM1L1Q8N609 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21■□□□□ 0.95
TRAM1L1Q8N609 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TRAM1L1Q8N609 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAM1L1Q8N609 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 AC137761.2-201ENST00000561729 223 ntBASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 AC145350.3-201ENST00000569033 163 ntBASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRAM1L1Q8N609 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 AC008175.2-201ENST00000612840 297 ntBASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRAM1L1Q8N609 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRAM1L1Q8N609 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms