Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD3Q8N328 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD3Q8N328 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD3Q8N328 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PGBD3Q8N328 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PGBD3Q8N328 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PGBD3Q8N328 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD3Q8N328 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD3Q8N328 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD3Q8N328 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PGBD3Q8N328 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD3Q8N328 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD3Q8N328 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD3Q8N328 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.52■■□□□ 1.04
PGBD3Q8N328 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD3Q8N328 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PGBD3Q8N328 CNN2P6-201ENST00000439038 900 ntBASIC21.52■■□□□ 1.04
PGBD3Q8N328 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD3Q8N328 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.52■■□□□ 1.04
PGBD3Q8N328 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD3Q8N328 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PGBD3Q8N328 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PGBD3Q8N328 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
PGBD3Q8N328 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PGBD3Q8N328 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD3Q8N328 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD3Q8N328 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.51■■□□□ 1.03
PGBD3Q8N328 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD3Q8N328 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD3Q8N328 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD3Q8N328 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD3Q8N328 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD3Q8N328 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD3Q8N328 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD3Q8N328 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD3Q8N328 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.51■■□□□ 1.03
PGBD3Q8N328 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.51■■□□□ 1.03
PGBD3Q8N328 AC133041.1-202ENST00000642053 222 ntBASIC21.51■■□□□ 1.03
PGBD3Q8N328 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PGBD3Q8N328 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PGBD3Q8N328 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PGBD3Q8N328 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PGBD3Q8N328 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.5■■□□□ 1.03
PGBD3Q8N328 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PGBD3Q8N328 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.5■■□□□ 1.03
PGBD3Q8N328 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PGBD3Q8N328 AC069152.1-201ENST00000438030 544 ntBASIC21.5■■□□□ 1.03
PGBD3Q8N328 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.5■■□□□ 1.03
PGBD3Q8N328 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
PGBD3Q8N328 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PGBD3Q8N328 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PGBD3Q8N328 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PGBD3Q8N328 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PGBD3Q8N328 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PGBD3Q8N328 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PGBD3Q8N328 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD3Q8N328 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.49■■□□□ 1.03
PGBD3Q8N328 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD3Q8N328 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.49■■□□□ 1.03
PGBD3Q8N328 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD3Q8N328 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD3Q8N328 FAM201B-201ENST00000458407 597 ntBASIC21.49■■□□□ 1.03
PGBD3Q8N328 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD3Q8N328 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.49■■□□□ 1.03
PGBD3Q8N328 AC133552.2-202ENST00000575694 574 ntBASIC21.49■■□□□ 1.03
PGBD3Q8N328 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.49■■□□□ 1.03
PGBD3Q8N328 LINC00526-201ENST00000581067 1875 ntBASIC21.49■■□□□ 1.03
PGBD3Q8N328 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PGBD3Q8N328 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.49■■□□□ 1.03
PGBD3Q8N328 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD3Q8N328 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD3Q8N328 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.48■■□□□ 1.03
PGBD3Q8N328 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD3Q8N328 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PGBD3Q8N328 TERF1P5-201ENST00000477545 1207 ntBASIC21.48■■□□□ 1.03
PGBD3Q8N328 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.48■■□□□ 1.03
PGBD3Q8N328 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
PGBD3Q8N328 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.48■■□□□ 1.03
PGBD3Q8N328 AC013268.1-206ENST00000638368 961 ntBASIC21.48■■□□□ 1.03
PGBD3Q8N328 AC112229.1-201ENST00000639295 961 ntBASIC21.48■■□□□ 1.03
PGBD3Q8N328 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD3Q8N328 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PGBD3Q8N328 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.47■■□□□ 1.03
PGBD3Q8N328 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.47■■□□□ 1.03
PGBD3Q8N328 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.47■■□□□ 1.03
PGBD3Q8N328 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.47■■□□□ 1.03
PGBD3Q8N328 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PGBD3Q8N328 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PGBD3Q8N328 AL117328.2-201ENST00000624617 1940 ntBASIC21.47■■□□□ 1.03
PGBD3Q8N328 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PGBD3Q8N328 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms