Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPH1Q70E73 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.24■□□□□ 0.99
RAPH1Q70E73 MIR4466-201ENST00000606121 54 ntBASIC21.24■□□□□ 0.99
RAPH1Q70E73 FEM1AP4-201ENST00000443167 1987 ntBASIC21.24■□□□□ 0.99
RAPH1Q70E73 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPH1Q70E73 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.24■□□□□ 0.99
RAPH1Q70E73 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAPH1Q70E73 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.23■□□□□ 0.99
RAPH1Q70E73 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAPH1Q70E73 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
RAPH1Q70E73 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
RAPH1Q70E73 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RAPH1Q70E73 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAPH1Q70E73 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAPH1Q70E73 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RAPH1Q70E73 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAPH1Q70E73 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.23■□□□□ 0.99
RAPH1Q70E73 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RAPH1Q70E73 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
RAPH1Q70E73 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAPH1Q70E73 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAPH1Q70E73 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAPH1Q70E73 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAPH1Q70E73 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.22■□□□□ 0.99
RAPH1Q70E73 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.22■□□□□ 0.99
RAPH1Q70E73 AC136469.2-201ENST00000623944 1028 ntBASIC21.22■□□□□ 0.99
RAPH1Q70E73 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RAPH1Q70E73 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAPH1Q70E73 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAPH1Q70E73 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAPH1Q70E73 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.22■□□□□ 0.99
RAPH1Q70E73 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.21■□□□□ 0.99
RAPH1Q70E73 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.21■□□□□ 0.99
RAPH1Q70E73 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
RAPH1Q70E73 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAPH1Q70E73 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAPH1Q70E73 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAPH1Q70E73 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAPH1Q70E73 AL034346.1-201ENST00000568244 1277 ntBASIC21.21■□□□□ 0.99
RAPH1Q70E73 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.21■□□□□ 0.99
RAPH1Q70E73 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAPH1Q70E73 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.21■□□□□ 0.99
RAPH1Q70E73 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAPH1Q70E73 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAPH1Q70E73 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RAPH1Q70E73 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.21■□□□□ 0.99
RAPH1Q70E73 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAPH1Q70E73 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.21■□□□□ 0.99
RAPH1Q70E73 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.21■□□□□ 0.99
RAPH1Q70E73 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAPH1Q70E73 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RAPH1Q70E73 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAPH1Q70E73 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAPH1Q70E73 AC092667.1-201ENST00000434301 2586 ntBASIC21.2■□□□□ 0.98
RAPH1Q70E73 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAPH1Q70E73 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAPH1Q70E73 AC011298.3-201ENST00000615796 283 ntBASIC21.2■□□□□ 0.98
RAPH1Q70E73 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAPH1Q70E73 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
RAPH1Q70E73 AP004607.7-201ENST00000527152 1677 ntBASIC21.2■□□□□ 0.98
RAPH1Q70E73 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.2■□□□□ 0.98
RAPH1Q70E73 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RAPH1Q70E73 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAPH1Q70E73 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RAPH1Q70E73 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAPH1Q70E73 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RAPH1Q70E73 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RAPH1Q70E73 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.19■□□□□ 0.98
RAPH1Q70E73 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
RAPH1Q70E73 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.19■□□□□ 0.98
RAPH1Q70E73 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPH1Q70E73 SLC47A1P1-202ENST00000449666 945 ntBASIC21.19■□□□□ 0.98
RAPH1Q70E73 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAPH1Q70E73 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPH1Q70E73 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPH1Q70E73 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPH1Q70E73 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPH1Q70E73 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.19■□□□□ 0.98
RAPH1Q70E73 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPH1Q70E73 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RAPH1Q70E73 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RAPH1Q70E73 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPH1Q70E73 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RAPH1Q70E73 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPH1Q70E73 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPH1Q70E73 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.18■□□□□ 0.98
RAPH1Q70E73 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RAPH1Q70E73 AC131281.2-201ENST00000520478 145 ntBASIC21.18■□□□□ 0.98
RAPH1Q70E73 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.18■□□□□ 0.98
RAPH1Q70E73 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.18■□□□□ 0.98
RAPH1Q70E73 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPH1Q70E73 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RAPH1Q70E73 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPH1Q70E73 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
RAPH1Q70E73 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
RAPH1Q70E73 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.17■□□□□ 0.98
RAPH1Q70E73 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RAPH1Q70E73 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.17■□□□□ 0.98
RAPH1Q70E73 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RAPH1Q70E73 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms