Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PTCHD4Q6ZW05 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PTCHD4Q6ZW05 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 AC079089.2-201ENST00000531211 1277 ntBASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 AL031602.1-201ENST00000633169 911 ntBASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PTCHD4Q6ZW05 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 AC092667.1-201ENST00000434301 2586 ntBASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.42■□□□□ 0.7
PTCHD4Q6ZW05 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 AL512631.2-201ENST00000604634 923 ntBASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 LINC01006-201ENST00000333319 2292 ntBASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PTCHD4Q6ZW05 AL121603.2-201ENST00000557373 2117 ntBASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 MIR3181-201ENST00000578512 73 ntBASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 OR7E47P-201ENST00000546390 1422 ntBASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.4■□□□□ 0.7
PTCHD4Q6ZW05 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.39■□□□□ 0.7
PTCHD4Q6ZW05 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PTCHD4Q6ZW05 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PTCHD4Q6ZW05 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.39■□□□□ 0.69
PTCHD4Q6ZW05 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms