Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MIR663A-201ENST00000385250 93 ntBASIC24.41■■□□□ 1.5
USH1GQ495M9 HLA-L-209ENST00000420110 1011 ntBASIC24.41■■□□□ 1.5
USH1GQ495M9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.41■■□□□ 1.5
USH1GQ495M9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
USH1GQ495M9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.41■■□□□ 1.5
USH1GQ495M9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.41■■□□□ 1.5
USH1GQ495M9 FAM99A-202ENST00000538190 1989 ntBASIC24.41■■□□□ 1.5
USH1GQ495M9 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
USH1GQ495M9 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
USH1GQ495M9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
USH1GQ495M9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
USH1GQ495M9 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
USH1GQ495M9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
USH1GQ495M9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
USH1GQ495M9 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
USH1GQ495M9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.4■■□□□ 1.5
USH1GQ495M9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
USH1GQ495M9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
USH1GQ495M9 AC006970.2-201ENST00000450065 779 ntBASIC24.4■■□□□ 1.5
USH1GQ495M9 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.4■■□□□ 1.5
USH1GQ495M9 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.4■■□□□ 1.5
USH1GQ495M9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
USH1GQ495M9 DUX4L16-201ENST00000555130 1264 ntBASIC24.4■■□□□ 1.5
USH1GQ495M9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.4■■□□□ 1.5
USH1GQ495M9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
USH1GQ495M9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC24.4■■□□□ 1.5
USH1GQ495M9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
USH1GQ495M9 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
USH1GQ495M9 GUSBP5-202ENST00000510805 1989 ntBASIC24.4■■□□□ 1.5
USH1GQ495M9 AC010542.4-201ENST00000563151 1910 ntBASIC24.39■■□□□ 1.5
USH1GQ495M9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
USH1GQ495M9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
USH1GQ495M9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC24.39■■□□□ 1.5
USH1GQ495M9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
USH1GQ495M9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.39■■□□□ 1.49
USH1GQ495M9 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.39■■□□□ 1.49
USH1GQ495M9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
USH1GQ495M9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
USH1GQ495M9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
USH1GQ495M9 KRT18P20-201ENST00000548986 1279 ntBASIC24.39■■□□□ 1.49
USH1GQ495M9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.39■■□□□ 1.49
USH1GQ495M9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
USH1GQ495M9 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.39■■□□□ 1.49
USH1GQ495M9 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.39■■□□□ 1.49
USH1GQ495M9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
USH1GQ495M9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
USH1GQ495M9 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
USH1GQ495M9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
USH1GQ495M9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
USH1GQ495M9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
USH1GQ495M9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.38■■□□□ 1.49
USH1GQ495M9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC24.38■■□□□ 1.49
USH1GQ495M9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.38■■□□□ 1.49
USH1GQ495M9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
USH1GQ495M9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC24.38■■□□□ 1.49
USH1GQ495M9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.38■■□□□ 1.49
USH1GQ495M9 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.38■■□□□ 1.49
USH1GQ495M9 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
USH1GQ495M9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.38■■□□□ 1.49
USH1GQ495M9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
USH1GQ495M9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
USH1GQ495M9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
USH1GQ495M9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
USH1GQ495M9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
USH1GQ495M9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.37■■□□□ 1.49
USH1GQ495M9 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
USH1GQ495M9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
USH1GQ495M9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.37■■□□□ 1.49
USH1GQ495M9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
USH1GQ495M9 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.37■■□□□ 1.49
USH1GQ495M9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
USH1GQ495M9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
USH1GQ495M9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
USH1GQ495M9 AC242852.2-201ENST00000615738 1807 ntBASIC24.36■■□□□ 1.49
USH1GQ495M9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
USH1GQ495M9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
USH1GQ495M9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.36■■□□□ 1.49
USH1GQ495M9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.36■■□□□ 1.49
USH1GQ495M9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.36■■□□□ 1.49
USH1GQ495M9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.36■■□□□ 1.49
USH1GQ495M9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.36■■□□□ 1.49
USH1GQ495M9 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.36■■□□□ 1.49
USH1GQ495M9 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.35■■□□□ 1.49
USH1GQ495M9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
USH1GQ495M9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
USH1GQ495M9 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC24.35■■□□□ 1.49
USH1GQ495M9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.35■■□□□ 1.49
USH1GQ495M9 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.35■■□□□ 1.49
USH1GQ495M9 AC010536.3-201ENST00000620306 533 ntBASIC24.35■■□□□ 1.49
USH1GQ495M9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
USH1GQ495M9 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms