Protein–RNA interactions for Protein: Q04062

RPN9, 26S proteasome regulatory subunit RPN9, yeastyeast

Known RBP Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN9Q04062 SLS1YLR139C 1932 nt3.3□□□□□ -1.88
RPN9Q04062 DSE1YER124C 1722 nt3.3□□□□□ -1.88
RPN9Q04062 HRD1YOL013C 1656 nt3.3□□□□□ -1.88
RPN9Q04062 SPH1YLR313C 1593 nt3.29□□□□□ -1.88
RPN9Q04062 ART10YLR392C 1557 nt3.29□□□□□ -1.88
RPN9Q04062 ARP9YMR033W 1404 nt3.29□□□□□ -1.88
RPN9Q04062 WHI3YNL197C 1986 nt3.29□□□□□ -1.88
RPN9Q04062 USE1YGL098W 738 nt3.29□□□□□ -1.88
RPN9Q04062 YHR097CYHR097C 1101 nt3.29□□□□□ -1.88
RPN9Q04062 SWD2YKL018W 990 nt3.29□□□□□ -1.88
RPN9Q04062 CMC1YKL137W 336 nt3.29□□□□□ -1.88
RPN9Q04062 COQ9YLR201C 783 nt3.29□□□□□ -1.88
RPN9Q04062 RPL13BYMR142C 600 nt3.29□□□□□ -1.88
RPN9Q04062 GOT1YMR292W 417 nt3.29□□□□□ -1.88
RPN9Q04062 snR11snR11 258 nt3.29□□□□□ -1.88
RPN9Q04062 MCT1YOR221C 1083 nt3.29□□□□□ -1.88
RPN9Q04062 APA1YCL050C 966 nt3.29□□□□□ -1.88
RPN9Q04062 BMS1YPL217C 3552 nt3.29□□□□□ -1.88
RPN9Q04062 SEC15YGL233W 2733 nt3.28□□□□□ -1.88
RPN9Q04062 ITT1YML068W 1395 nt3.28□□□□□ -1.88
RPN9Q04062 OPI6YDL096C 327 nt3.28□□□□□ -1.88
RPN9Q04062 APA2YDR530C 978 nt3.28□□□□□ -1.88
RPN9Q04062 LSM4YER112W 564 nt3.28□□□□□ -1.88
RPN9Q04062 tK(UUU)DtK(UUU)D 73 nt3.28□□□□□ -1.88
RPN9Q04062 tK(UUU)G1tK(UUU)G1 73 nt3.28□□□□□ -1.88
RPN9Q04062 tK(UUU)G2tK(UUU)G2 73 nt3.28□□□□□ -1.88
RPN9Q04062 tK(UUU)KtK(UUU)K 73 nt3.28□□□□□ -1.88
RPN9Q04062 tK(UUU)LtK(UUU)L 73 nt3.28□□□□□ -1.88
RPN9Q04062 tK(UUU)OtK(UUU)O 73 nt3.28□□□□□ -1.88
RPN9Q04062 tK(UUU)PtK(UUU)P 73 nt3.28□□□□□ -1.88
RPN9Q04062 tR(UCU)Q1tR(UCU)Q1 73 nt3.28□□□□□ -1.88
RPN9Q04062 GLG2YJL137C 1143 nt3.28□□□□□ -1.88
RPN9Q04062 ECM13YBL043W 774 nt3.28□□□□□ -1.88
RPN9Q04062 SSU72YNL222W 621 nt3.28□□□□□ -1.88
RPN9Q04062 YOR238WYOR238W 912 nt3.28□□□□□ -1.88
RPN9Q04062 BI3Q0115 1554 nt3.28□□□□□ -1.88
RPN9Q04062 ARG5,6YER069W 2592 nt3.28□□□□□ -1.88
RPN9Q04062 VIP1YLR410W 3441 nt3.28□□□□□ -1.89
RPN9Q04062 POL2YNL262W 6669 nt3.28□□□□□ -1.89
RPN9Q04062 CIN8YEL061C 3003 nt3.27□□□□□ -1.89
RPN9Q04062 SEC27YGL137W 2670 nt3.27□□□□□ -1.89
RPN9Q04062 UBC9YDL064W 474 nt3.27□□□□□ -1.89
RPN9Q04062 PEX10YDR265W 1014 nt3.27□□□□□ -1.89
RPN9Q04062 RPS23AYGR118W 438 nt3.27□□□□□ -1.89
RPN9Q04062 DLS1YJL065C 504 nt3.27□□□□□ -1.89
RPN9Q04062 YAL034C-BYAL034C-B 354 nt3.27□□□□□ -1.89
RPN9Q04062 CDC5YMR001C 2118 nt3.27□□□□□ -1.89
RPN9Q04062 DIA1YMR316W 1011 nt3.27□□□□□ -1.89
RPN9Q04062 VAM10YOR068C 345 nt3.27□□□□□ -1.89
RPN9Q04062 RPS23BYPR132W 438 nt3.27□□□□□ -1.89
RPN9Q04062 HTA1YDR225W 399 nt3.26□□□□□ -1.89
RPN9Q04062 NKP1YDR383C 717 nt3.26□□□□□ -1.89
RPN9Q04062 SMT3YDR510W 306 nt3.26□□□□□ -1.89
RPN9Q04062 RNH203YLR154C 333 nt3.26□□□□□ -1.89
RPN9Q04062 RPS28BYLR264W 204 nt3.26□□□□□ -1.89
RPN9Q04062 YBL028CYBL028C 321 nt3.26□□□□□ -1.89
RPN9Q04062 GRX7YBR014C 612 nt3.26□□□□□ -1.89
RPN9Q04062 YPR053CYPR053C 456 nt3.26□□□□□ -1.89
RPN9Q04062 PBP2YBR233W 1242 nt3.26□□□□□ -1.89
RPN9Q04062 AI4Q0065 1671 nt3.26□□□□□ -1.89
RPN9Q04062 SPO14YKR031C 5052 nt3.26□□□□□ -1.89
RPN9Q04062 PHO81YGR233C 3537 nt3.26□□□□□ -1.89
RPN9Q04062 GIS4YML006C 2325 nt3.25□□□□□ -1.89
RPN9Q04062 RPL22BYFL034C-A 369 nt3.25□□□□□ -1.89
RPN9Q04062 YGL063C-AYGL063C-A 150 nt3.25□□□□□ -1.89
RPN9Q04062 YGL117WYGL117W 798 nt3.25□□□□□ -1.89
RPN9Q04062 MTM1YGR257C 1101 nt3.25□□□□□ -1.89
RPN9Q04062 GIS2YNL255C 462 nt3.25□□□□□ -1.89
RPN9Q04062 VBA4YDR119W 2307 nt3.24□□□□□ -1.89
RPN9Q04062 YDL242WYDL242W 354 nt3.24□□□□□ -1.89
RPN9Q04062 RPN9YDR427W 1182 nt3.24□□□□□ -1.89
RPN9Q04062 ECM11YDR446W 909 nt3.24□□□□□ -1.89
RPN9Q04062 YGL214WYGL214W 486 nt3.24□□□□□ -1.89
RPN9Q04062 MMF1YIL051C 438 nt3.24□□□□□ -1.89
RPN9Q04062 RGI2YIL057C 495 nt3.24□□□□□ -1.89
RPN9Q04062 YLR365WYLR365W 333 nt3.24□□□□□ -1.89
RPN9Q04062 CSM3YMR048W 954 nt3.24□□□□□ -1.89
RPN9Q04062 YNR062CYNR062C 984 nt3.24□□□□□ -1.89
RPN9Q04062 ENA2YDR039C 3276 nt3.24□□□□□ -1.89
RPN9Q04062 ENA1YDR040C 3276 nt3.24□□□□□ -1.89
RPN9Q04062 CIN1YOR349W 3045 nt3.24□□□□□ -1.89
RPN9Q04062 DUN1YDL101C 1542 nt3.24□□□□□ -1.89
RPN9Q04062 RPN1YHR027C 2982 nt3.23□□□□□ -1.89
RPN9Q04062 YEL010WYEL010W 351 nt3.23□□□□□ -1.89
RPN9Q04062 SMD3YLR147C 306 nt3.23□□□□□ -1.89
RPN9Q04062 GPN3YLR243W 819 nt3.23□□□□□ -1.89
RPN9Q04062 YLR347W-AYLR347W-A 141 nt3.23□□□□□ -1.89
RPN9Q04062 YMR087WYMR087W 855 nt3.23□□□□□ -1.89
RPN9Q04062 TUM1YOR251C 915 nt3.23□□□□□ -1.89
RPN9Q04062 MRS2YOR334W 1413 nt3.23□□□□□ -1.89
RPN9Q04062 TYE7YOR344C 876 nt3.23□□□□□ -1.89
RPN9Q04062 NIP7YPL211W 546 nt3.23□□□□□ -1.89
RPN9Q04062 YEL025CYEL025C 3567 nt3.23□□□□□ -1.89
RPN9Q04062 FAR1YJL157C 2493 nt3.22□□□□□ -1.89
RPN9Q04062 YDL180WYDL180W 1644 nt3.22□□□□□ -1.89
RPN9Q04062 ERG9YHR190W 1335 nt3.22□□□□□ -1.89
RPN9Q04062 GEP7YGL057C 864 nt3.22□□□□□ -1.89
RPN9Q04062 YHR182C-AYHR182C-A 474 nt3.22□□□□□ -1.89
RPN9Q04062 YAL064WYAL064W 285 nt3.22□□□□□ -1.89
RPN9Q04062 PEX34YCL056C 435 nt3.22□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 33.5 ms