Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 PHR1YOR386W 1698 nt4.83□□□□□ -1.64
UBP3Q01477 YDR491CYDR491C 492 nt4.82□□□□□ -1.64
UBP3Q01477 LSB1YGR136W 726 nt4.82□□□□□ -1.64
UBP3Q01477 LRP1YHR081W 555 nt4.82□□□□□ -1.64
UBP3Q01477 YJL175WYJL175W 513 nt4.82□□□□□ -1.64
UBP3Q01477 RPL17AYKL180W 555 nt4.82□□□□□ -1.64
UBP3Q01477 RBL2YOR265W 321 nt4.82□□□□□ -1.64 RIP-Chip
UBP3Q01477 YSY6YBR162W-A 198 nt4.82□□□□□ -1.64 RIP-Chip
UBP3Q01477 GAD1YMR250W 1758 nt4.82□□□□□ -1.64
UBP3Q01477 TFB2YPL122C 1542 nt4.82□□□□□ -1.64
UBP3Q01477 ARP4YJL081C 1470 nt4.81□□□□□ -1.64 RIP-Chip
UBP3Q01477 VPS45YGL095C 1734 nt4.81□□□□□ -1.64
UBP3Q01477 TEL1YBL088C 8364 nt4.81□□□□□ -1.64 RIP-Chip
UBP3Q01477 snR9snR9 187 nt4.81□□□□□ -1.64
UBP3Q01477 HNT2YDR305C 654 nt4.81□□□□□ -1.64
UBP3Q01477 tS(AGA)D3tS(AGA)D3 83 nt4.81□□□□□ -1.64
UBP3Q01477 UBI4YLL039C 1146 nt4.81□□□□□ -1.64
UBP3Q01477 BUR2YLR226W 1188 nt4.81□□□□□ -1.64
UBP3Q01477 RPP0YLR340W 939 nt4.81□□□□□ -1.64
UBP3Q01477 ARC18YLR370C 537 nt4.81□□□□□ -1.64
UBP3Q01477 YOR293C-AYOR293C-A 150 nt4.81□□□□□ -1.64
UBP3Q01477 PBN1YCL052C 1251 nt4.81□□□□□ -1.64 RIP-Chip
UBP3Q01477 MDM34YGL219C 1380 nt4.8□□□□□ -1.64
UBP3Q01477 DAP2YHR028C 2457 nt4.8□□□□□ -1.64
UBP3Q01477 YDR545C-AYDR545C-A 480 nt4.8□□□□□ -1.64
UBP3Q01477 YEL077W-AYEL077W-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 YER190C-BYER190C-B 483 nt4.8□□□□□ -1.64
UBP3Q01477 YFL068WYFL068W 483 nt4.8□□□□□ -1.64
UBP3Q01477 YGR296C-BYGR296C-B 483 nt4.8□□□□□ -1.64
UBP3Q01477 YHL050W-AYHL050W-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 YHR219C-AYHR219C-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 YIL177W-AYIL177W-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 ASG7YJL170C 630 nt4.8□□□□□ -1.64
UBP3Q01477 YJL225W-AYJL225W-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 YAL047W-AYAL047W-A 330 nt4.8□□□□□ -1.64
UBP3Q01477 YLL066W-AYLL066W-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 YLL067W-AYLL067W-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 HRI1YLR301W 735 nt4.8□□□□□ -1.64
UBP3Q01477 YLR466C-AYLR466C-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 YLR467C-AYLR467C-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 YPT7YML001W 627 nt4.8□□□□□ -1.64
UBP3Q01477 YML133W-BYML133W-B 483 nt4.8□□□□□ -1.64
UBP3Q01477 YMR052C-AYMR052C-A 366 nt4.8□□□□□ -1.64
UBP3Q01477 DDR48YMR173W 1293 nt4.8□□□□□ -1.64
UBP3Q01477 YNL339W-BYNL339W-B 483 nt4.8□□□□□ -1.64
UBP3Q01477 YBL113W-AYBL113W-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 YOR396C-AYOR396C-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 YPL283W-BYPL283W-B 483 nt4.8□□□□□ -1.64
UBP3Q01477 YPR204C-AYPR204C-A 483 nt4.8□□□□□ -1.64
UBP3Q01477 OAF3YKR064W 2592 nt4.8□□□□□ -1.64
UBP3Q01477 SSH4YKL124W 1740 nt4.8□□□□□ -1.64
UBP3Q01477 BOP2YLR267W 1713 nt4.8□□□□□ -1.64
UBP3Q01477 VBA2YBR293W 1425 nt4.8□□□□□ -1.64
UBP3Q01477 MTL1YGR023W 1656 nt4.8□□□□□ -1.64 RIP-Chip
UBP3Q01477 PAN1YIR006C 4443 nt4.79□□□□□ -1.64
UBP3Q01477 CDC5YMR001C 2118 nt4.79□□□□□ -1.64
UBP3Q01477 YBL005W-AYBL005W-A 1323 nt4.79□□□□□ -1.64
UBP3Q01477 AIM21YIR003W 2040 nt4.79□□□□□ -1.64
UBP3Q01477 EPT1YHR123W 1176 nt4.79□□□□□ -1.64
UBP3Q01477 YJR037WYJR037W 384 nt4.79□□□□□ -1.64
UBP3Q01477 YNK1YKL067W 462 nt4.79□□□□□ -1.64 RIP-Chip
UBP3Q01477 TOM22YNL131W 459 nt4.79□□□□□ -1.64
UBP3Q01477 UTP25YIL091C 2166 nt4.79□□□□□ -1.64
UBP3Q01477 SAF1YBR280C 1914 nt4.79□□□□□ -1.64 RIP-Chip
UBP3Q01477 MRH4YGL064C 1686 nt4.79□□□□□ -1.64
UBP3Q01477 IZH3YLR023C 1632 nt4.79□□□□□ -1.64
UBP3Q01477 GYP6YJL044C 1377 nt4.78□□□□□ -1.64
UBP3Q01477 CWC2YDL209C 1020 nt4.78□□□□□ -1.64 RIP-Chip
UBP3Q01477 TVP15YDR100W 432 nt4.78□□□□□ -1.64
UBP3Q01477 YEL045CYEL045C 426 nt4.78□□□□□ -1.64
UBP3Q01477 COX4YGL187C 468 nt4.78□□□□□ -1.64
UBP3Q01477 COX13YGL191W 390 nt4.78□□□□□ -1.64
UBP3Q01477 SLX9YGR081C 633 nt4.78□□□□□ -1.64
UBP3Q01477 SPO13YHR014W 876 nt4.78□□□□□ -1.64
UBP3Q01477 YIL029CYIL029C 429 nt4.78□□□□□ -1.64
UBP3Q01477 IRC18YJL037W 675 nt4.78□□□□□ -1.64
UBP3Q01477 SOP4YJL192C 705 nt4.78□□□□□ -1.64
UBP3Q01477 YJR012CYJR012C 624 nt4.78□□□□□ -1.64
UBP3Q01477 KAP114YGL241W 3015 nt4.78□□□□□ -1.64 RIP-Chip
UBP3Q01477 SSB1YDL229W 1842 nt4.78□□□□□ -1.64
UBP3Q01477 KIN3YAR018C 1308 nt4.77□□□□□ -1.65
UBP3Q01477 YDL163WYDL163W 303 nt4.77□□□□□ -1.65
UBP3Q01477 ATG31YDR022C 591 nt4.77□□□□□ -1.65 RIP-Chip
UBP3Q01477 YDR320W-BYDR320W-B 138 nt4.77□□□□□ -1.65
UBP3Q01477 YDR340WYDR340W 303 nt4.77□□□□□ -1.65
UBP3Q01477 PUG1YER185W 912 nt4.77□□□□□ -1.65
UBP3Q01477 AML1YGR001C 747 nt4.77□□□□□ -1.65
UBP3Q01477 RPL16AYIL133C 600 nt4.77□□□□□ -1.65 RIP-Chip
UBP3Q01477 YLR171WYLR171W 390 nt4.77□□□□□ -1.65
UBP3Q01477 YNR021WYNR021W 1215 nt4.77□□□□□ -1.65 RIP-Chip
UBP3Q01477 GCY1YOR120W 939 nt4.77□□□□□ -1.65
UBP3Q01477 SUA7YPR086W 1038 nt4.77□□□□□ -1.65
UBP3Q01477 YGR117CYGR117C 1431 nt4.77□□□□□ -1.65
UBP3Q01477 NHX1YDR456W 1902 nt4.76□□□□□ -1.65
UBP3Q01477 GPP2YER062C 753 nt4.76□□□□□ -1.65 RIP-Chip
UBP3Q01477 YER158CYER158C 1722 nt4.76□□□□□ -1.65
UBP3Q01477 YER181CYER181C 324 nt4.76□□□□□ -1.65
UBP3Q01477 RTT102YGR275W 474 nt4.76□□□□□ -1.65
UBP3Q01477 YHR138CYHR138C 345 nt4.76□□□□□ -1.65
UBP3Q01477 ACF4YJR083C 930 nt4.76□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 101.9 ms