Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.04■□□□□ 0.32
CX3CL1P78423 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.04■□□□□ 0.32
CX3CL1P78423 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.04■□□□□ 0.32
CX3CL1P78423 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.04■□□□□ 0.32
CX3CL1P78423 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CL1P78423 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CL1P78423 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.04■□□□□ 0.32
CX3CL1P78423 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CL1P78423 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.04■□□□□ 0.32
CX3CL1P78423 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.04■□□□□ 0.32
CX3CL1P78423 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CL1P78423 FAM99A-202ENST00000538190 1989 ntBASIC17.04■□□□□ 0.32
CX3CL1P78423 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CL1P78423 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CX3CL1P78423 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 ASL-203ENST00000380839 1765 ntTSL 5 BASIC17.03■□□□□ 0.32
CX3CL1P78423 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CX3CL1P78423 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CX3CL1P78423 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.03■□□□□ 0.32
CX3CL1P78423 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.03■□□□□ 0.32
CX3CL1P78423 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.03■□□□□ 0.32
CX3CL1P78423 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.03■□□□□ 0.32
CX3CL1P78423 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.03■□□□□ 0.32
CX3CL1P78423 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CX3CL1P78423 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.03■□□□□ 0.32
CX3CL1P78423 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CX3CL1P78423 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CX3CL1P78423 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.02■□□□□ 0.32
CX3CL1P78423 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CL1P78423 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CX3CL1P78423 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CL1P78423 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CL1P78423 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CL1P78423 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CL1P78423 IRS3P-201ENST00000223076 1006 ntBASIC17.02■□□□□ 0.32
CX3CL1P78423 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.02■□□□□ 0.32
CX3CL1P78423 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CX3CL1P78423 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.02■□□□□ 0.32
CX3CL1P78423 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CX3CL1P78423 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.02■□□□□ 0.32
CX3CL1P78423 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.02■□□□□ 0.31
CX3CL1P78423 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CL1P78423 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CL1P78423 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CL1P78423 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CX3CL1P78423 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CX3CL1P78423 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CX3CL1P78423 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.01■□□□□ 0.31
CX3CL1P78423 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.01■□□□□ 0.31
CX3CL1P78423 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.01■□□□□ 0.31
CX3CL1P78423 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CX3CL1P78423 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
CX3CL1P78423 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CX3CL1P78423 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.01■□□□□ 0.31
CX3CL1P78423 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17■□□□□ 0.31
CX3CL1P78423 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17■□□□□ 0.31
CX3CL1P78423 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CL1P78423 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17■□□□□ 0.31
CX3CL1P78423 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17■□□□□ 0.31
CX3CL1P78423 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17■□□□□ 0.31
CX3CL1P78423 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CL1P78423 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CL1P78423 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CL1P78423 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17■□□□□ 0.31
CX3CL1P78423 AL354811.1-201ENST00000610286 706 ntBASIC17■□□□□ 0.31
CX3CL1P78423 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
CX3CL1P78423 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CX3CL1P78423 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17■□□□□ 0.31
CX3CL1P78423 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.99■□□□□ 0.31
CX3CL1P78423 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
CX3CL1P78423 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.99■□□□□ 0.31
CX3CL1P78423 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CL1P78423 AC012414.1-201ENST00000556676 535 ntBASIC16.99■□□□□ 0.31
CX3CL1P78423 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CL1P78423 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms