Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN6P56747 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN6P56747 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN6P56747 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN6P56747 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN6P56747 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN6P56747 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN6P56747 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.42■□□□□ 0.86
CLDN6P56747 AC128676.1-201ENST00000454392 318 ntBASIC20.42■□□□□ 0.86
CLDN6P56747 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN6P56747 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.42■□□□□ 0.86
CLDN6P56747 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLDN6P56747 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
CLDN6P56747 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CLDN6P56747 AP006587.3-201ENST00000525742 1516 ntBASIC20.42■□□□□ 0.86
CLDN6P56747 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CLDN6P56747 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN6P56747 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN6P56747 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.41■□□□□ 0.86
CLDN6P56747 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.41■□□□□ 0.86
CLDN6P56747 AC097658.1-201ENST00000475555 843 ntBASIC20.41■□□□□ 0.86
CLDN6P56747 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.41■□□□□ 0.86
CLDN6P56747 AC142381.4-202ENST00000563973 229 ntBASIC20.41■□□□□ 0.86
CLDN6P56747 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN6P56747 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN6P56747 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN6P56747 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN6P56747 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN6P56747 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLDN6P56747 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN6P56747 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN6P56747 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN6P56747 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN6P56747 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN6P56747 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN6P56747 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.4■□□□□ 0.86
CLDN6P56747 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CLDN6P56747 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN6P56747 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.4■□□□□ 0.86
CLDN6P56747 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN6P56747 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.4■□□□□ 0.86
CLDN6P56747 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLDN6P56747 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.4■□□□□ 0.86
CLDN6P56747 AC053503.5-201ENST00000601508 636 ntBASIC20.4■□□□□ 0.86
CLDN6P56747 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
CLDN6P56747 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLDN6P56747 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN6P56747 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN6P56747 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN6P56747 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN6P56747 AL512625.2-201ENST00000417533 625 ntBASIC20.39■□□□□ 0.85
CLDN6P56747 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDN6P56747 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN6P56747 AC091874.3-201ENST00000512672 1195 ntBASIC20.39■□□□□ 0.85
CLDN6P56747 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.39■□□□□ 0.85
CLDN6P56747 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN6P56747 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN6P56747 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN6P56747 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN6P56747 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CLDN6P56747 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN6P56747 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN6P56747 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN6P56747 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN6P56747 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN6P56747 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CLDN6P56747 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
CLDN6P56747 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN6P56747 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN6P56747 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN6P56747 AP006294.2-201ENST00000641667 209 ntBASIC20.38■□□□□ 0.85
CLDN6P56747 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN6P56747 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN6P56747 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN6P56747 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN6P56747 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN6P56747 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN6P56747 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.38■□□□□ 0.85
CLDN6P56747 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN6P56747 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN6P56747 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN6P56747 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN6P56747 RPS2P4-201ENST00000476944 856 ntBASIC20.37■□□□□ 0.85
CLDN6P56747 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN6P56747 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN6P56747 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN6P56747 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CLDN6P56747 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN6P56747 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CLDN6P56747 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN6P56747 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN6P56747 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN6P56747 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN6P56747 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN6P56747 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN6P56747 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN6P56747 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN6P56747 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN6P56747 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms