Protein–RNA interactions for Protein: P53549

RPT4, 26S proteasome subunit RPT4, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT4P53549 YDL162CYDL162C 357 nt3.46□□□□□ -1.86
RPT4P53549 HTD2YHR067W 843 nt3.46□□□□□ -1.86
RPT4P53549 RPC37YKR025W 849 nt3.46□□□□□ -1.86
RPT4P53549 BUR2YLR226W 1188 nt3.46□□□□□ -1.86
RPT4P53549 RDN58-1RDN58-1 158 nt3.46□□□□□ -1.86
RPT4P53549 RDN58-2RDN58-2 158 nt3.46□□□□□ -1.86
RPT4P53549 YPL088WYPL088W 1029 nt3.46□□□□□ -1.86
RPT4P53549 PRM4YPL156C 855 nt3.46□□□□□ -1.86
RPT4P53549 AEP2YMR282C 1743 nt3.45□□□□□ -1.86
RPT4P53549 EBS1YDR206W 2655 nt3.45□□□□□ -1.86
RPT4P53549 MIT1YEL007W 2001 nt3.45□□□□□ -1.86
RPT4P53549 YDR149CYDR149C 708 nt3.45□□□□□ -1.86
RPT4P53549 LRS4YDR439W 1044 nt3.45□□□□□ -1.86
RPT4P53549 YEL032C-AYEL032C-A 162 nt3.45□□□□□ -1.86
RPT4P53549 YFL051CYFL051C 483 nt3.45□□□□□ -1.86
RPT4P53549 YGR114CYGR114C 390 nt3.45□□□□□ -1.86
RPT4P53549 AIM23YJL131C 1071 nt3.45□□□□□ -1.86
RPT4P53549 YAL031W-AYAL031W-A 309 nt3.45□□□□□ -1.86
RPT4P53549 PBA1YLR199C 831 nt3.45□□□□□ -1.86
RPT4P53549 SMA2YML066C 1110 nt3.45□□□□□ -1.86
RPT4P53549 YMR294W-AYMR294W-A 360 nt3.45□□□□□ -1.86
RPT4P53549 ERV15YBR210W 429 nt3.45□□□□□ -1.86
RPT4P53549 HUL5YGL141W 2733 nt3.45□□□□□ -1.86
RPT4P53549 FRE4YNR060W 2160 nt3.45□□□□□ -1.86
RPT4P53549 MIP6YHR015W 1980 nt3.44□□□□□ -1.86
RPT4P53549 STP1YDR463W 1560 nt3.44□□□□□ -1.86
RPT4P53549 TGL2YDR058C 981 nt3.44□□□□□ -1.86
RPT4P53549 CGR1YGL029W 363 nt3.44□□□□□ -1.86
RPT4P53549 YGR064WYGR064W 369 nt3.44□□□□□ -1.86
RPT4P53549 DOG1YHR044C 741 nt3.44□□□□□ -1.86
RPT4P53549 YHR214C-DYHR214C-D 294 nt3.44□□□□□ -1.86
RPT4P53549 YAR069CYAR069C 294 nt3.44□□□□□ -1.86
RPT4P53549 YBR013CYBR013C 390 nt3.44□□□□□ -1.86
RPT4P53549 TMA108YIL137C 2841 nt3.44□□□□□ -1.86
RPT4P53549 GCN1YGL195W 8019 nt3.44□□□□□ -1.86
RPT4P53549 YEL025CYEL025C 3567 nt3.44□□□□□ -1.86
RPT4P53549 MIG1YGL035C 1515 nt3.44□□□□□ -1.86
RPT4P53549 YLR177WYLR177W 1887 nt3.43□□□□□ -1.86
RPT4P53549 SHR3YDL212W 633 nt3.43□□□□□ -1.86
RPT4P53549 FRQ1YDR373W 573 nt3.43□□□□□ -1.86
RPT4P53549 MPC3YGR243W 441 nt3.43□□□□□ -1.86
RPT4P53549 YGR270C-AYGR270C-A 219 nt3.43□□□□□ -1.86
RPT4P53549 EMC2YJR088C 879 nt3.43□□□□□ -1.86
RPT4P53549 RLP7YNL002C 969 nt3.43□□□□□ -1.86
RPT4P53549 UFE1YOR075W 1041 nt3.43□□□□□ -1.86
RPT4P53549 ALG8YOR067C 1734 nt3.43□□□□□ -1.86
RPT4P53549 BUB1YGR188C 3066 nt3.43□□□□□ -1.86
RPT4P53549 KRI1YNL308C 1776 nt3.43□□□□□ -1.86
RPT4P53549 MTL1YGR023W 1656 nt3.43□□□□□ -1.86
RPT4P53549 STU1YBL034C 4542 nt3.42□□□□□ -1.86
RPT4P53549 MSM1YGR171C 1728 nt3.42□□□□□ -1.86
RPT4P53549 DET1YDR051C 1005 nt3.42□□□□□ -1.86
RPT4P53549 MEI4YER044C-A 1227 nt3.42□□□□□ -1.86
RPT4P53549 VPS25YJR102C 609 nt3.42□□□□□ -1.86
RPT4P53549 RPF2YKR081C 1035 nt3.42□□□□□ -1.86
RPT4P53549 LDS2YOL047C 1071 nt3.42□□□□□ -1.86
RPT4P53549 YDR089WYDR089W 2610 nt3.42□□□□□ -1.86
RPT4P53549 BAR1YIL015W 1764 nt3.42□□□□□ -1.86
RPT4P53549 NAB6YML117W 3405 nt3.42□□□□□ -1.86
RPT4P53549 SSE2YBR169C 2082 nt3.42□□□□□ -1.86
RPT4P53549 YML096WYML096W 1578 nt3.42□□□□□ -1.86
RPT4P53549 ZDS2YML109W 2829 nt3.41□□□□□ -1.86
RPT4P53549 YIL054WYIL054W 318 nt3.41□□□□□ -1.86
RPT4P53549 YIL161WYIL161W 708 nt3.41□□□□□ -1.86
RPT4P53549 YVH1YIR026C 1095 nt3.41□□□□□ -1.86
RPT4P53549 YJR020WYJR020W 333 nt3.41□□□□□ -1.86
RPT4P53549 CMD1YBR109C 444 nt3.41□□□□□ -1.86
RPT4P53549 PKP2YGL059W 1476 nt3.41□□□□□ -1.86
RPT4P53549 ILS1YBL076C 3219 nt3.4□□□□□ -1.86
RPT4P53549 RRP42YDL111C 798 nt3.4□□□□□ -1.87
RPT4P53549 PUG1YER185W 912 nt3.4□□□□□ -1.87
RPT4P53549 TDA10YGR205W 873 nt3.4□□□□□ -1.87
RPT4P53549 SUC2YIL162W 1599 nt3.4□□□□□ -1.87
RPT4P53549 PSF2YJL072C 642 nt3.4□□□□□ -1.87
RPT4P53549 YLR198CYLR198C 360 nt3.4□□□□□ -1.87
RPT4P53549 SAM37YMR060C 984 nt3.4□□□□□ -1.87
RPT4P53549 MCT1YOR221C 1083 nt3.4□□□□□ -1.87
RPT4P53549 YPL276WYPL276W 438 nt3.4□□□□□ -1.87
RPT4P53549 YPR050CYPR050C 414 nt3.4□□□□□ -1.87
RPT4P53549 snR44snR44 211 nt3.4□□□□□ -1.87
RPT4P53549 CTP1YBR291C 900 nt3.4□□□□□ -1.87
RPT4P53549 PEX1YKL197C 3132 nt3.4□□□□□ -1.87
RPT4P53549 YJR030CYJR030C 2238 nt3.4□□□□□ -1.87
RPT4P53549 TOP1YOL006C 2310 nt3.39□□□□□ -1.87
RPT4P53549 YDR526CYDR526C 471 nt3.39□□□□□ -1.87
RPT4P53549 ERP6YGL002W 651 nt3.39□□□□□ -1.87
RPT4P53549 YHL005CYHL005C 393 nt3.39□□□□□ -1.87
RPT4P53549 SNX4YJL036W 1272 nt3.39□□□□□ -1.87
RPT4P53549 FMP41YNL168C 780 nt3.39□□□□□ -1.87
RPT4P53549 IZH2YOL002C 954 nt3.39□□□□□ -1.87
RPT4P53549 AME1YBR211C 975 nt3.39□□□□□ -1.87
RPT4P53549 MDM10YAL010C 1482 nt3.39□□□□□ -1.87
RPT4P53549 VPS64YDR200C 1815 nt3.39□□□□□ -1.87
RPT4P53549 MSB2YGR014W 3921 nt3.38□□□□□ -1.87
RPT4P53549 SPH1YLR313C 1593 nt3.38□□□□□ -1.87
RPT4P53549 ARP9YMR033W 1404 nt3.38□□□□□ -1.87
RPT4P53549 PET100YDR079W 336 nt3.38□□□□□ -1.87
RPT4P53549 YGR126WYGR126W 693 nt3.38□□□□□ -1.87
RPT4P53549 LSM1YJL124C 519 nt3.38□□□□□ -1.87
RPT4P53549 YOL162WYOL162W 648 nt3.38□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 63.7 ms